RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SUCLG2Q96I99 432 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 ZPBPQ9BS86 351 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 USP29Q9HBJ7 922 aa5.75□□□□□ -1.49
LINC01040-201ENST00000425048 PNMA8BQ9ULN7 279 aaPredicted RBP5.75□□□□□ -1.49
LINC01040-201ENST00000425048 A8MVJ9 347 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 INPPL1O15357 1258 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 TGFB3P10600 412 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 HSPA6P17066 643 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 IL6STP40189 918 aaPredicted RBP5.74□□□□□ -1.49
LINC01040-201ENST00000425048 RGS19P49795 217 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 PGDP52209 483 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 PNPLA1Q8N8W4 532 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 FAM71DQ8N9W8 422 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 VPS50Q96JG6 964 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 NLRP4Q96MN2 994 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 FZD4Q9ULV1 537 aa5.74□□□□□ -1.49
LINC01040-201ENST00000425048 H7C4K7 107 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 RASSF9O75901 435 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 HGFP14210 728 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 SLC7A1P30825 629 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 MCM5P33992 734 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 PTDSS1P48651 473 aaKnown RBP5.73□□□□□ -1.49
LINC01040-201ENST00000425048 AGFG1P52594 562 aaKnown RBP5.73□□□□□ -1.49
LINC01040-201ENST00000425048 DEUP1Q05D60 604 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 ANO6Q4KMQ2 910 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 B3GNT9Q6UX72 402 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 ZNF793Q6ZN11 406 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 IL31RAQ8NI17 732 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 PPP1R35Q8TAP8 253 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 SLC35G2Q8TBE7 412 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 BCAS4Q8TDM0 211 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 WIPF2Q8TF74 440 aaPredicted RBP5.73□□□□□ -1.49
LINC01040-201ENST00000425048 MAML1Q92585 1016 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 NUAK2Q9H093 628 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 NMRK2Q9NPI5 230 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 TMEM45AQ9NWC5 275 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 ASAP1Q9ULH1 1129 aa5.73□□□□□ -1.49
LINC01040-201ENST00000425048 TTBK1Q5TCY1 1321 aaPredicted RBP5.73□□□□□ -1.49
LINC01040-201ENST00000425048 MBD3L4A6NDZ8 208 aaPredicted RBP5.72□□□□□ -1.49
LINC01040-201ENST00000425048 MBD3L3A6NE82 208 aaPredicted RBP5.72□□□□□ -1.49
LINC01040-201ENST00000425048 PYCARD-AS1I3L0S3 204 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 RRP9O43818 475 aaKnown RBP5.72□□□□□ -1.49
LINC01040-201ENST00000425048 USP12O75317 370 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 PARP1P09874 1014 aaKnown RBP5.72□□□□□ -1.49
LINC01040-201ENST00000425048 TNFRSF1BP20333 461 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 ADRA1DP25100 572 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 GPC5P78333 572 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 ST3GAL2Q16842 350 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 C18orf65Q6ZTR6 163 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 ZCRB1Q8TBF4 217 aaKnown RBP5.72□□□□□ -1.49
LINC01040-201ENST00000425048 SLC25A28Q96A46 364 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 AIFM3Q96NN9 605 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 ACO2Q99798 780 aaKnown RBP5.72□□□□□ -1.49
LINC01040-201ENST00000425048 SCNM1Q9BWG6 230 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 SLCO5A1Q9H2Y9 848 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 TMEM8AQ9HCN3 771 aa5.72□□□□□ -1.49
LINC01040-201ENST00000425048 LACTBL1A8MY62 500 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 FOXN3O00409 490 aaPredicted RBP5.71□□□□□ -1.5
LINC01040-201ENST00000425048 PIAS2O75928 621 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 SYF2O95926 243 aaKnown RBP5.71□□□□□ -1.5
LINC01040-201ENST00000425048 PLAUP00749 431 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 FGF2P09038 288 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 CDC25AP30304 524 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 ITGA8P53708 1063 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 RHDQ02161 417 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 HYAL1Q12794 435 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 ARHGEF7Q14155 803 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 KPNB1Q14974 876 aaKnown RBP5.71□□□□□ -1.5
LINC01040-201ENST00000425048 MICU3Q86XE3 530 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 METTL25Q8N6Q8 603 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 C11orf44Q8N8P7 122 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 DHX36Q9H2U1 1008 aaKnown RBP5.71□□□□□ -1.5
LINC01040-201ENST00000425048 ATP6V0A4Q9HBG4 840 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 ARL8BQ9NVJ2 186 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 STEAP1Q9UHE8 339 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 SPATA31A1Q5TZJ5 1347 aa5.71□□□□□ -1.5
LINC01040-201ENST00000425048 C2CD4BA6NLJ0 364 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 C4orf47A7E2U8 309 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 TBX3O15119 743 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 SUMO3P55854 103 aaPredicted RBP5.7□□□□□ -1.5
LINC01040-201ENST00000425048 TXNL4AP83876 142 aaKnown RBP5.7□□□□□ -1.5
LINC01040-201ENST00000425048 ZNF585BQ52M93 769 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 NPNTQ6UXI9 565 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 Q6ZTC4 211 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 FAM57BQ71RH2 274 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 B4GALNT2Q8NHY0 566 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 SMCR8Q8TEV9 937 aaPredicted RBP5.7□□□□□ -1.5
LINC01040-201ENST00000425048 TRMT61AQ96FX7 289 aaKnown RBP5.7□□□□□ -1.5
LINC01040-201ENST00000425048 ZNF668Q96K58 619 aaPredicted RBP5.7□□□□□ -1.5
LINC01040-201ENST00000425048 TMEM204Q9BSN7 226 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 TM2D2Q9BX73 214 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 SACM1LQ9NTJ5 587 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 DECR2Q9NUI1 292 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 ICKQ9UPZ9 632 aa5.7□□□□□ -1.5
LINC01040-201ENST00000425048 TRIM43BA6NCK2 446 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 AGPSO00116 658 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 SLC28A2O43868 658 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 SNX2O60749 519 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 KLRC1P26715 233 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 ALDH7A1P49419 539 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms