RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 ADH1CP00326 375 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 PIK3CAP42336 1068 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 TNFRSF4P43489 277 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 TYRO3Q06418 890 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 HSF5Q4G112 596 aaPredicted RBP17.07■□□□□ 0.32
DDR1-234ENST00000424544 COBLL1Q53SF7 1204 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 EMC10Q5UCC4 262 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 KLHDC10Q6PID8 442 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 GPRIN1Q7Z2K8 1008 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 BBS7Q8IWZ6 715 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 IL17RCQ8NAC3 791 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 OLIG1Q8TAK6 271 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 SEMA4DQ92854 862 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 FUCA2Q9BTY2 467 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 RXFP3Q9NSD7 469 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 FAM49BQ9NUQ9 324 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 HCN2Q9UL51 889 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 USP3Q9Y6I4 520 aa17.07■□□□□ 0.32
DDR1-234ENST00000424544 DCLK1O15075 740 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 HOXC11O43248 304 aaPredicted RBP17.06■□□□□ 0.32
DDR1-234ENST00000424544 FAM200BP0CF97 657 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 ADH5P11766 374 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 PPP1R2P41236 205 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 GRIA2P42262 883 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 PRCPP42785 496 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 KIF11P52732 1056 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 ZNF445P59923 1031 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 GAD2Q05329 585 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 STIM1Q13586 685 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 STX1AQ16623 288 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 KRT39Q6A163 491 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 TMEM25Q86YD3 366 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 ZC3H3Q8IXZ2 948 aaKnown RBP17.06■□□□□ 0.32
DDR1-234ENST00000424544 SMYD4Q8IYR2 804 aaPredicted RBP17.06■□□□□ 0.32
DDR1-234ENST00000424544 KCNV2Q8TDN2 545 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 CNOT6LQ96LI5 555 aaKnown RBP17.06■□□□□ 0.32
DDR1-234ENST00000424544 DUSP16Q9BY84 665 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 NIF3L1Q9GZT8 377 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 NMUR1Q9HB89 426 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 TLR8Q9NR97 1041 aaKnown RBP17.06■□□□□ 0.32
DDR1-234ENST00000424544 SPHK2Q9NRA0 654 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 COQ4Q9Y3A0 265 aa17.06■□□□□ 0.32
DDR1-234ENST00000424544 PPP1R3GB7ZBB8 358 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 SGK1O00141 431 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 ADAM23O75077 832 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 KRT13P13646 458 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 ADORA2BP29275 332 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 DGKEP52429 567 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 CT47A1Q5JQC4 288 aaPredicted RBP17.05■□□□□ 0.32
DDR1-234ENST00000424544 LRSAM1Q6UWE0 723 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 SCD5Q86SK9 330 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 CCDC33Q8N5R6 958 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 TSTD1Q8NFU3 115 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 DHTKD1Q96HY7 919 aaPredicted RBP17.05■□□□□ 0.32
DDR1-234ENST00000424544 UBXN6Q9BZV1 441 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 FAM124BQ9H5Z6 455 aaPredicted RBP17.05■□□□□ 0.32
DDR1-234ENST00000424544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDR1-234ENST00000424544 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDR1-234ENST00000424544 DACH1Q9UI36 760 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 STARD13Q9Y3M8 1113 aa17.05■□□□□ 0.32
DDR1-234ENST00000424544 MYH10P35580 1976 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.04■□□□□ 0.32
DDR1-234ENST00000424544 TULP3O75386 442 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 APODP05090 189 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 CD44P16070 742 aaKnown RBP17.04■□□□□ 0.32
DDR1-234ENST00000424544 ATP5C1P36542 298 aaKnown RBP17.04■□□□□ 0.32
DDR1-234ENST00000424544 SEC13P55735 322 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 SF3A2Q15428 464 aaKnown RBP17.04■□□□□ 0.32
DDR1-234ENST00000424544 DPCR1Q3MIW9 517 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 PPP1R26Q5T8A7 1209 aaPredicted RBP17.04■□□□□ 0.32
DDR1-234ENST00000424544 ALLCQ8N6M5 410 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 TXNDC5Q8NBS9 432 aaKnown RBP17.04■□□□□ 0.32
DDR1-234ENST00000424544 EEF2KMTQ96G04 330 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 IMPG2Q9BZV3 1241 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 ARHGEF4Q9NR80 690 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 RAB20Q9NX57 234 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 MARK1Q9P0L2 795 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 SH3BP1Q9Y3L3 701 aa17.04■□□□□ 0.32
DDR1-234ENST00000424544 GON4LQ3T8J9 2241 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 BCLAF3A2AJT9 711 aaKnown RBP17.03■□□□□ 0.32
DDR1-234ENST00000424544 CETN3O15182 167 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 CYP26A1O43174 497 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 RHOBTB1O94844 696 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 ACO1P21399 889 aaKnown RBP17.03■□□□□ 0.32
DDR1-234ENST00000424544 MPLP40238 635 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 RAD23BP54727 409 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 CCDC6Q16204 474 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 USP39Q53GS9 565 aaKnown RBP17.03■□□□□ 0.32
DDR1-234ENST00000424544 PMS2CLQ68D20 193 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 CCDC186Q7Z3E2 898 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 TTC39CQ8N584 583 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 FBXL13Q8NEE6 735 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 MDGA1Q8NFP4 955 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 TATDN2Q93075 761 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 VPS45Q9NRW7 570 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
DDR1-234ENST00000424544 ACACBO00763 2458 aa17.02■□□□□ 0.32
DDR1-234ENST00000424544 A0A1W2PQH9 124 aa17.02■□□□□ 0.32
DDR1-234ENST00000424544 PSMA7O14818 248 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms