RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 CCDC13Q8IYE1 715 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 ZCCHC9Q8N567 271 aaKnown RBP9.41□□□□□ -0.9
SNX20-203ENST00000423026 SPATA18Q8TC71 538 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 ZNF473Q8WTR7 871 aaKnown RBP9.41□□□□□ -0.9
SNX20-203ENST00000423026 KCTD13Q8WZ19 329 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 FAM149B1Q96BN6 582 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 PGM2Q96G03 612 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 UROC1Q96N76 676 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 CCDC77Q9BR77 488 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 DDX23Q9BUQ8 820 aaKnown RBP9.41□□□□□ -0.9
SNX20-203ENST00000423026 SNRNP25Q9BV90 132 aaKnown RBP9.41□□□□□ -0.9
SNX20-203ENST00000423026 CD248Q9HCU0 757 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
SNX20-203ENST00000423026 KLHL33A6NCF5 533 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 CLDN5O00501 218 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 APOL1O14791 398 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 RASGRF2O14827 1237 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 MGEA5O60502 916 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 B3GAT3O94766 335 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 ACSL3O95573 720 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 FAM107AO95990 144 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 POMCP01189 267 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 RBP3P10745 1247 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 ETS1P14921 441 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 EZRP15311 586 aaKnown RBP9.4□□□□□ -0.9
SNX20-203ENST00000423026 SLC8A1P32418 973 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 MATKP42679 507 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 AFF1P51825 1210 aaKnown RBP9.4□□□□□ -0.9
SNX20-203ENST00000423026 HDAC4P56524 1084 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 ROR1Q01973 937 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 ADIGQ0VDE8 80 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 MMRN1Q13201 1228 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 TUSC3Q13454 348 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 TRIM71Q2Q1W2 868 aaKnown RBP9.4□□□□□ -0.9
SNX20-203ENST00000423026 DARS2Q6PI48 645 aaKnown RBP9.4□□□□□ -0.9
SNX20-203ENST00000423026 CYP4V2Q6ZWL3 525 aaPredicted RBP9.4□□□□□ -0.9
SNX20-203ENST00000423026 STRADAQ7RTN6 431 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 PRUNE1Q86TP1 453 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 RELL1Q8IUW5 271 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 UHMK1Q8TAS1 419 aaKnown RBP9.4□□□□□ -0.9
SNX20-203ENST00000423026 CLEC4CQ8WTT0 213 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 CENPIQ92674 756 aaPredicted RBP9.4□□□□□ -0.9
SNX20-203ENST00000423026 ZNF670Q9BS34 389 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 PCDH18Q9HCL0 1135 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
SNX20-203ENST00000423026 CACNG4Q9UBN1 327 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 DSEQ9UL01 958 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 PTCH2Q9Y6C5 1203 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 PCNTO95613 3336 aa9.4□□□□□ -0.9
SNX20-203ENST00000423026 ZNF487B1APH4 448 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 H7C0C1 242 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 SMAPO00193 183 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 AP1G2O75843 785 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 FBXO21O94952 628 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 ZFXP17010 805 aaPredicted RBP9.4□□□□□ -0.91
SNX20-203ENST00000423026 TGM2P21980 687 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 ATP5OP48047 213 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 BCAR1P56945 870 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 MAP3K7CLP57077 242 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 MAGOHP61326 146 aaKnown RBP9.4□□□□□ -0.91
SNX20-203ENST00000423026 YWHAZP63104 245 aaKnown RBP9.4□□□□□ -0.91
SNX20-203ENST00000423026 PPP2R2AP63151 447 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 MRPS5P82675 430 aaKnown RBP9.4□□□□□ -0.91
SNX20-203ENST00000423026 NOMO1Q15155 1222 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 KYNUQ16719 465 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 SLC25A52Q3SY17 297 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 RAB6CQ53S08 254 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 ANKRD20A8PQ5CZ79 823 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 ZC3H12AQ5D1E8 599 aaKnown RBP9.4□□□□□ -0.91
SNX20-203ENST00000423026 PPP6R3Q5H9R7 873 aaPredicted RBP9.4□□□□□ -0.91
SNX20-203ENST00000423026 C6orf89Q6UWU4 347 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 CLEC20AQ6ZU45 233 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 ECHDC2Q86YB7 292 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 DEFB106AQ8N104 65 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 GLIS1Q8NBF1 620 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 MYCBPAPQ8TBZ2 947 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 TTC25Q96NG3 672 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 RBM15Q96T37 977 aaKnown RBP eCLIP9.4□□□□□ -0.91
SNX20-203ENST00000423026 RAB6CQ9H0N0 254 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 ADAM7Q9H2U9 754 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 SLC40A1Q9NP59 571 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 KRT82Q9NSB4 513 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 DNAJC17Q9NVM6 304 aaKnown RBP9.4□□□□□ -0.91
SNX20-203ENST00000423026 STAP1Q9ULZ2 295 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 SHOC2Q9UQ13 582 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 INPP5FQ9Y2H2 1132 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 TIMM13Q9Y5L4 95 aaPredicted RBP9.4□□□□□ -0.91
SNX20-203ENST00000423026 THSD7BQ9C0I4 1608 aa9.4□□□□□ -0.91
SNX20-203ENST00000423026 SMIM23A6NLE4 172 aa9.39□□□□□ -0.91
SNX20-203ENST00000423026 DAB1O75553 588 aa9.39□□□□□ -0.91
SNX20-203ENST00000423026 AGTP01019 485 aa9.39□□□□□ -0.91
SNX20-203ENST00000423026 CKBP12277 381 aa9.39□□□□□ -0.91
SNX20-203ENST00000423026 PECAM1P16284 738 aaPredicted RBP9.39□□□□□ -0.91
SNX20-203ENST00000423026 ATP5DP30049 168 aa9.39□□□□□ -0.91
SNX20-203ENST00000423026 NOS2P35228 1153 aa9.39□□□□□ -0.91
SNX20-203ENST00000423026 MAGEA4P43358 317 aa9.39□□□□□ -0.91
SNX20-203ENST00000423026 SULT1E1P49888 294 aa9.39□□□□□ -0.91
SNX20-203ENST00000423026 ZKSCAN8Q15776 578 aaPredicted RBP9.39□□□□□ -0.91
SNX20-203ENST00000423026 TIGD5Q53EQ6 642 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms