RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 NDRG1Q92597 394 aaKnown RBP11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 SEMA4DQ92854 862 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 P2RY11Q96G91 374 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 CNOT6LQ96LI5 555 aaKnown RBP11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 CEP295NLQ96MC4 621 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 KLF16Q9BXK1 252 aaPredicted RBP11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 VRTNQ9H8Y1 702 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 SPHK2Q9NRA0 654 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 TMEM74BQ9NUR3 256 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 DNAJC17Q9NVM6 304 aaKnown RBP11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 IL37Q9NZH6 218 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 TBC1D14Q9P2M4 693 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 HPSEQ9Y251 543 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 RAD54BQ9Y620 910 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 MYH10P35580 1976 aa11.98□□□□□ -0.49
NDUFA3-208ENST00000422029 LNP1A1A4G5 178 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 HHLA1C9JL84 531 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 KCNK5O95279 499 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 ZDHHC11BP0C7U3 371 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 FAM200BP0CF97 657 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 RARGP13631 454 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 P4HA1P13674 534 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 DPYDQ12882 1025 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 ADAM9Q13443 819 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 PMS2CLQ68D20 193 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 CLEC20AQ6ZU45 233 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 RASSF3Q86WH2 238 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 DDX42Q86XP3 938 aaKnown RBP eCLIP11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 ZNF513Q8N8E2 541 aaPredicted RBP11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 TATDN2Q93075 761 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 HEXIM2Q96MH2 286 aaKnown RBP11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 ARID3AQ99856 593 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 BBS2Q9BXC9 721 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 CD93Q9NPY3 652 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 TLR8Q9NR97 1041 aaKnown RBP11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 DEC1Q9P2X7 70 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 PCDHGA5Q9Y5G8 931 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 DNAH14Q0VDD8 3507 aa11.97□□□□□ -0.49
NDUFA3-208ENST00000422029 WASH3PC4AMC7 463 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 KHNYNO15037 678 aaKnown RBP11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 GREM1O60565 184 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 ALDH1A2O94788 518 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 KRT13P13646 458 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 ATP5C1P36542 298 aaKnown RBP11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 NOVA1P51513 510 aaKnown RBP11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 KRT85P78386 507 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 EOGTQ5NDL2 527 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 C10orf120Q5SQS8 335 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 PPP1R26Q5T8A7 1209 aaPredicted RBP11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 ISM2Q6H9L7 571 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 KIAA1211LQ6NV74 962 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 KRBA2Q6ZNG9 492 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 SCD5Q86SK9 330 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 ETFBKMTQ8IXQ9 262 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 OR2I1PQ8NGU4 316 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 OVCA2Q8WZ82 227 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 LSM14BQ9BX40 385 aaKnown RBP11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 CSNK1G1Q9HCP0 422 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 POLMQ9NP87 494 aaPredicted RBP11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 NAGPAQ9UK23 515 aa11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 RALYQ9UKM9 306 aaKnown RBP11.96□□□□□ -0.49
NDUFA3-208ENST00000422029 TPRP12270 2363 aaKnown RBP11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 PRRT4C9JH25 899 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 RHOBTB3O94955 611 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 ZNF202O95125 648 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 CALCAP01258 141 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 CFIP05156 583 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 TYRP14679 529 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 GABRG2P18507 467 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 ITPKAP23677 461 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 P2RY2P41231 377 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 TNFRSF4P43489 277 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 EFEMP1Q12805 493 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 LRMPQ12912 555 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 FOXC1Q12948 553 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 PNOCQ13519 176 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 ST3GAL2Q16842 350 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 MAP7D1Q3KQU3 841 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 TRIM61Q5EBN2 209 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 SNX30Q5VWJ9 437 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 GRAMD4Q6IC98 578 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 LPCAT2Q7L5N7 544 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 UNC93AQ86WB7 457 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 OLIG1Q8TAK6 271 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 TAF4BQ92750 862 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 CCDC47Q96A33 483 aaKnown RBP11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 HNRNPABQ99729 332 aaKnown RBP11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 NT5C1AQ9BXI3 368 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 NIF3L1Q9GZT8 377 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 CACNA2D2Q9NY47 1150 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 USP25Q9UHP3 1055 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 RASAL2Q9UJF2 1139 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 CYP8B1Q9UNU6 501 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 SCML2Q9UQR0 700 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 TRAF3IP3Q9Y228 551 aa11.95□□□□□ -0.5
NDUFA3-208ENST00000422029 CNOT1A5YKK6 2376 aaKnown RBP11.94□□□□□ -0.5
NDUFA3-208ENST00000422029 A0A0A0MRY4 1105 aa11.94□□□□□ -0.5
NDUFA3-208ENST00000422029 FAM92AA1XBS5 289 aa11.94□□□□□ -0.5
NDUFA3-208ENST00000422029 TULP2O00295 520 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms