RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 KLHL14Q9P2G3 628 aa10.11□□□□□ -0.79
CMSS1-201ENST00000421999 LAMB1P07942 1786 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CFAP69A5D8W1 941 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 SNX2O60749 519 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 RNASEH1O60930 286 aaKnown RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 TADA3O75528 432 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 OXCT1P55809 520 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 FAXCQ5TGI0 409 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 TRIM67Q6ZTA4 783 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 TPGS1Q6ZTW0 290 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 TAS1R3Q7RTX0 852 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 EMID1Q96A84 441 aaPredicted RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 TMA16Q96EY4 203 aaKnown RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 ZSWIM1Q9BR11 485 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 SLC25A13Q9UJS0 675 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 NOVA2Q9UNW9 492 aaKnown RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 GLUD1P00367 558 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 PIGRP01833 764 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 LTFP02788 710 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 FGFR1P11362 822 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CYBAP13498 195 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 LAG3P18627 525 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 ARHGAP25P42331 645 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CCT5P48643 541 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 GNGT1P63211 74 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 GTF2H3Q13889 308 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CNGA2Q16280 664 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 GLE1Q53GS7 698 aaKnown RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 ANKMY2Q8IV38 441 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 B3GALNT2Q8NCR0 500 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 PLEKHO2Q8TD55 490 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 ULK4Q96C45 1275 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 FIZ1Q96SL8 496 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 ADAM33Q9BZ11 813 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 LATS2Q9NRM7 1088 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CACNG4Q9UBN1 327 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 USP18Q9UMW8 372 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CDY1Q9Y6F8 540 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 SSC5DA1L4H1 1573 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 LRRC37AA6NMS7 1700 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 TTI1O43156 1089 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 MAP3K7O43318 606 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 LZTS3O60299 673 aaPredicted RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 PROSCO94903 275 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CLTBP09497 229 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CAV1Q03135 178 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 STARD3Q14849 445 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 TTC19Q6DKK2 380 aaPredicted RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 PIGZQ86VD9 579 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 FAM71BQ8TC56 605 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 ARHGEF2Q92974 986 aaKnown RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 ERLEC1Q96DZ1 483 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 CARD9Q9H257 536 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 APOBEC3GQ9HC16 384 aaKnown RBP10.1□□□□□ -0.79
CMSS1-201ENST00000421999 MID2Q9UJV3 735 aa10.1□□□□□ -0.79
CMSS1-201ENST00000421999 A0A1W2PQ45 241 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 A0A1W2PQY0 241 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 GOLGA8KD6RF30 607 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 MAP3K13O43283 966 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 MTSS1O43312 755 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 ATP5C1P36542 298 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 MOGSQ13724 837 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CDCA2Q69YH5 1023 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 UNC93AQ86WB7 457 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 HERC6Q8IVU3 1022 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 FAM71DQ8N9W8 422 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 GPR152Q8TDT2 470 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CSGALNACT1Q8TDX6 532 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 SNX19Q92543 992 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 SNF8Q96H20 258 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CELF6Q96J87 481 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CALCOCO1Q9P1Z2 691 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 GNEQ9Y223 722 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 ECM29Q5VYK3 1845 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 A0A0A6YYK5 440 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 FAM187AA6NFU0 413 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 ARL5CA6NH57 179 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 COPEO14579 308 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 TYK2P29597 1187 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CLCNKBP51801 687 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 TPD52P55327 224 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 DUSP4Q13115 394 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 MTFR1Q15390 333 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 DDR2Q16832 855 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 EMBQ6PCB8 327 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 TMEM139Q8IV31 216 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 ATAD1Q8NBU5 361 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 PPHLN1Q8NEY8 458 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 TTC17Q96AE7 1141 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 FBXL18Q96ME1 805 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 SERPINB11Q96P15 392 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 TTYH3Q9C0H2 523 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 POLR2AP24928 1970 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 TBC1D3BA6NDS4 549 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 CLDN5O00501 218 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 STX7O15400 261 aaKnown RBP10.09□□□□□ -0.79
CMSS1-201ENST00000421999 NDUFS3O75489 264 aa10.09□□□□□ -0.79
CMSS1-201ENST00000421999 JCHAINP01591 159 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms