RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 ZNF677Q86XU0 584 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 MIB1Q86YT6 1006 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 FMNL3Q8IVF7 1028 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 SCML4Q8N228 414 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 WDTC1Q8N5D0 677 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 TTC8Q8TAM2 541 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 IPO4Q8TEX9 1081 aaKnown RBP16.52■□□□□ 0.24
BRAT1-202ENST00000421712 SLC20A1Q8WUM9 679 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 CPLX3Q8WVH0 158 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 IRGQQ8WZA9 623 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 EDEM1Q92611 657 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 PBXIP1Q96AQ6 731 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 SLC4A5Q9BY07 1137 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 ABCC13Q9NSE7 274 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 DUS2Q9NX74 493 aaKnown RBP16.52■□□□□ 0.24
BRAT1-202ENST00000421712 STRIP2Q9ULQ0 834 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 LRRC53A6NM62 1247 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 SCAMP3O14828 347 aaKnown RBP16.51■□□□□ 0.23
BRAT1-202ENST00000421712 SART1O43290 800 aaKnown RBP16.51■□□□□ 0.23
BRAT1-202ENST00000421712 ZXDBP98169 803 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 CDR2Q01850 454 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 ASIC2Q16515 512 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 SFMBT2Q5VUG0 894 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 TRIM68Q6AZZ1 485 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 OR6B2Q6IFH4 312 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 TMEM110Q86TL2 294 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 MSANTD4Q8NCY6 345 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 ZNF397Q8NF99 534 aaPredicted RBP16.51■□□□□ 0.23
BRAT1-202ENST00000421712 RIN3Q8TB24 985 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 CPA5Q8WXQ8 436 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 DDX1Q92499 740 aaKnown RBP16.51■□□□□ 0.23
BRAT1-202ENST00000421712 BAP1Q92560 729 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 DNASE1L2Q92874 299 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 CPXM1Q96SM3 734 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 EBF3Q9H4W6 596 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 ARHGEF3Q9NR81 526 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 HEBP1Q9NRV9 189 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 OLA1Q9NTK5 396 aaKnown RBP16.51■□□□□ 0.23
BRAT1-202ENST00000421712 MYO6Q9UM54 1294 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 WNT6Q9Y6F9 365 aa16.51■□□□□ 0.23
BRAT1-202ENST00000421712 CAPN9O14815 690 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 LTFP02788 710 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 HMBSP08397 361 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 RPL34P49207 117 aaKnown RBP16.5■□□□□ 0.23
BRAT1-202ENST00000421712 TNK2Q07912 1038 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 USP4Q13107 963 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 PDGFRLQ15198 375 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 MLF2Q15773 248 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-202ENST00000421712 TMEM31Q5JXX7 168 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 NAA35Q5VZE5 725 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 KLHDC10Q6PID8 442 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 HFE2Q6ZVN8 426 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 BHLHA9Q7RTU4 235 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 ERICH1Q86X53 443 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 ZNF276Q8N554 614 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 FLCNQ8NFG4 579 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 OSCP1Q8WVF1 389 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 ASIC4Q96FT7 647 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 SHDQ96IW2 340 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 KLF16Q9BXK1 252 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-202ENST00000421712 EDEM3Q9BZQ6 932 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 RBSNQ9H1K0 784 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 GTSE1Q9NYZ3 720 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 MARCH2Q9P0N8 246 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 TJP2Q9UDY2 1190 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 NOCTQ9UK39 431 aaKnown RBP16.5■□□□□ 0.23
BRAT1-202ENST00000421712 LSM7Q9UK45 103 aaKnown RBP16.5■□□□□ 0.23
BRAT1-202ENST00000421712 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.5■□□□□ 0.23
BRAT1-202ENST00000421712 MUC3AQ02505 3323 aa16.5■□□□□ 0.23
BRAT1-202ENST00000421712 SLC12A8A0AV02 714 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 KRBA1A5PL33 1030 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 SLC9A3R1O14745 358 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-202ENST00000421712 PAPSS1O43252 624 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-202ENST00000421712 LSM8O95777 96 aaKnown RBP16.49■□□□□ 0.23
BRAT1-202ENST00000421712 ERBB2P04626 1255 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 NCAM1P13591 858 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 ARSAP15289 507 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 TCF3P15923 654 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 TNFAIP3P21580 790 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 PBX1P40424 430 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 COG7P83436 770 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 FMO1Q01740 532 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 ITPRIPL2Q3MIP1 535 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 FIGNQ5HY92 759 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 IER5LQ5T953 404 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 TRIM72Q6ZMU5 477 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 TPRG1Q6ZUI0 275 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 AGPAT1Q99943 283 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 FAM83CQ9BQN1 747 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 TRIM62Q9BVG3 475 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 LINC00597Q9H2U6 94 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 TRPV5Q9NQA5 729 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 SFMBT1Q9UHJ3 866 aa16.49■□□□□ 0.23
BRAT1-202ENST00000421712 BDP1A6H8Y1 2624 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 E2F8A0AVK6 867 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 GPR37L1O60883 481 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 PDGFBP01127 241 aaPredicted RBP16.48■□□□□ 0.23
BRAT1-202ENST00000421712 CHRNB2P17787 502 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms