RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 RNF8O76064 485 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 PAPLNO95428 1278 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 PRLRP16471 622 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 DCAF6Q58WW2 860 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 PPM1LQ5SGD2 360 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 LRRC38Q5VT99 294 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 PAPD7Q5XG87 772 aaKnown RBP22.52■■□□□ 1.2
ABCF3-202ENST00000421340 BTBD8Q5XKL5 378 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 STRADAQ7RTN6 431 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 BNIPLQ7Z465 357 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 ELMOD1Q8N336 334 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 KIF18AQ8NI77 898 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 CD101Q93033 1021 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 PGAP3Q96FM1 320 aaPredicted RBP22.52■■□□□ 1.2
ABCF3-202ENST00000421340 HES6Q96HZ4 224 aa22.52■■□□□ 1.2
ABCF3-202ENST00000421340 COLQQ9Y215 455 aaPredicted RBP22.52■■□□□ 1.2
ABCF3-202ENST00000421340 TMEM110-MUSTN1A8MSY1 372 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 SPOPO43791 374 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 FTCDO95954 541 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 NCAM1P13591 858 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 CTNNA2P26232 953 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 IFRD2Q12894 506 aaPredicted RBP22.51■■□□□ 1.19
ABCF3-202ENST00000421340 RPS6KA1Q15418 735 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 CC2D1AQ6P1N0 951 aaPredicted RBP22.51■■□□□ 1.19
ABCF3-202ENST00000421340 ZNF512Q96ME7 567 aaPredicted RBP22.51■■□□□ 1.19
ABCF3-202ENST00000421340 CFAP57Q96MR6 1250 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 CDK5RAP1Q96SZ6 601 aaKnown RBP22.51■■□□□ 1.19
ABCF3-202ENST00000421340 TLR10Q9BXR5 811 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 GOLPH3Q9H4A6 298 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 MAN1C1Q9NR34 630 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 ZDHHC7Q9NXF8 308 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 GMIPQ9P107 970 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 NAALADL1Q9UQQ1 740 aa22.51■■□□□ 1.19
ABCF3-202ENST00000421340 A0A1W2PQH9 124 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 CCDC66A2RUB6 948 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 F9P00740 461 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 RALAP11233 206 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 PABPC1LQ4VXU2 614 aaKnown RBP22.5■■□□□ 1.19
ABCF3-202ENST00000421340 SYPL2Q5VXT5 272 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 ADGRD2Q7Z7M1 963 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 NMUR1Q9HB89 426 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 OLA1Q9NTK5 396 aaKnown RBP22.5■■□□□ 1.19
ABCF3-202ENST00000421340 MAGED2Q9UNF1 606 aaPredicted RBP22.5■■□□□ 1.19
ABCF3-202ENST00000421340 PCDHA3Q9Y5H8 950 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 HCFC2Q9Y5Z7 792 aa22.5■■□□□ 1.19
ABCF3-202ENST00000421340 COL4A4P53420 1690 aaPredicted RBP22.49■■□□□ 1.19
ABCF3-202ENST00000421340 PER2O15055 1255 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 FANCGO15287 622 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 PSTPIP1O43586 416 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 LRCH4O75427 683 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 CSPG5O95196 566 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 EPCAMP16422 314 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 CTNNA1P35221 906 aaKnown RBP22.49■■□□□ 1.19
ABCF3-202ENST00000421340 KCNC3Q14003 757 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 HADHQ16836 314 aaKnown RBP22.49■■□□□ 1.19
ABCF3-202ENST00000421340 MSANTD2Q6P1R3 559 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 POLNQ7Z5Q5 900 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 RHOT1Q8IXI2 618 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 ARFGAP1Q8N6T3 406 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 UBL4BQ8N7F7 174 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 STKLD1Q8NE28 680 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 RNF139Q8WU17 664 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.49■■□□□ 1.19
ABCF3-202ENST00000421340 TRPM5Q9NZQ8 1165 aa22.49■■□□□ 1.19
ABCF3-202ENST00000421340 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.49■■□□□ 1.19
ABCF3-202ENST00000421340 ZNF840PA6NDX5 716 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 RFXAPO00287 272 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 FGF19O95750 216 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 ATP1A1P05023 1023 aaKnown RBP22.48■■□□□ 1.19
ABCF3-202ENST00000421340 GBP1P32455 592 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 NRIP1P48552 1158 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 PEX5P50542 639 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 TUBP50607 506 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 TUBB2AQ13885 445 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 C15orf59Q2T9L4 293 aaPredicted RBP22.48■■□□□ 1.19
ABCF3-202ENST00000421340 TMEM184AQ6ZMB5 413 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 TADA2BQ86TJ2 420 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 RBM23Q86U06 439 aaKnown RBP22.48■■□□□ 1.19
ABCF3-202ENST00000421340 FAM172AQ8WUF8 416 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 EDEM1Q92611 657 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 TBCBQ99426 244 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 TUBB2BQ9BVA1 445 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 LRRC3Q9BY71 257 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 NSUN3Q9H649 340 aaKnown RBP22.48■■□□□ 1.19
ABCF3-202ENST00000421340 OSER1Q9NX31 292 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 USTQ9Y2C2 406 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 HYOU1Q9Y4L1 999 aa22.48■■□□□ 1.19
ABCF3-202ENST00000421340 CES2O00748 559 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 ENC1O14682 589 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 DDX3YO15523 660 aaKnown RBP22.47■■□□□ 1.19
ABCF3-202ENST00000421340 XYLBO75191 536 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 IGLV3-25P01717 112 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 F11P03951 625 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 KRT7P08729 469 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 RARGP13631 454 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 POU3F3P20264 500 aaPredicted RBP22.47■■□□□ 1.19
ABCF3-202ENST00000421340 PGFP49763 221 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 SULT1E1P49888 294 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 EPHA5P54756 1037 aa22.47■■□□□ 1.19
ABCF3-202ENST00000421340 HDAC4P56524 1084 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms