RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CCT2P78371 535 aaKnown RBP9.62□□□□□ -0.87
TRIM39-206ENST00000420746 IL9RQ01113 521 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 E2F5Q15329 346 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 ARL13BQ3SXY8 428 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 LINC00303Q3SY05 128 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 EARS2Q5JPH6 523 aaKnown RBP9.62□□□□□ -0.87
TRIM39-206ENST00000420746 KCNT1Q5JUK3 1230 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 VSTM1Q6UX27 236 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 CCDC81Q6ZN84 652 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 DENND5BQ6ZUT9 1274 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 ADAT2Q7Z6V5 191 aaKnown RBP9.62□□□□□ -0.87
TRIM39-206ENST00000420746 GATAD2AQ86YP4 633 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 TMPRSS6Q8IU80 811 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 SPATA2LQ8IUW3 424 aaPredicted RBP9.62□□□□□ -0.87
TRIM39-206ENST00000420746 DAW1Q8N136 415 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 KCNN1Q92952 543 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 XPO6Q96QU8 1125 aaKnown RBP9.62□□□□□ -0.87
TRIM39-206ENST00000420746 ACE2Q9BYF1 805 aaPredicted RBP9.62□□□□□ -0.87
TRIM39-206ENST00000420746 HAPLN2Q9GZV7 340 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 BHMT2Q9H2M3 363 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 POLR1BQ9H9Y6 1135 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 POLD4Q9HCU8 107 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 DNAJC17Q9NVM6 304 aaKnown RBP9.62□□□□□ -0.87
TRIM39-206ENST00000420746 C2CD2Q9Y426 696 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 STON1Q9Y6Q2 735 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 ITPR2Q14571 2701 aa9.62□□□□□ -0.87
TRIM39-206ENST00000420746 KPNA7A9QM74 516 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 CPLX1O14810 134 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 SCAMP3O14828 347 aaKnown RBP9.61□□□□□ -0.87
TRIM39-206ENST00000420746 TRIM24O15164 1050 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 OGTO15294 1046 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 MPOP05164 745 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 AFMP43652 599 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 C21orf59P57076 290 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 RACK1P63244 317 aaKnown RBP9.61□□□□□ -0.87
TRIM39-206ENST00000420746 NOP14P78316 857 aaKnown RBP9.61□□□□□ -0.87
TRIM39-206ENST00000420746 NFKB2Q00653 900 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 ST3GAL1Q11201 340 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 TMEM132DQ14C87 1099 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 ANO4Q32M45 955 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 SV2CQ496J9 727 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 SGO2Q562F6 1265 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 HAUS3Q68CZ6 603 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 JADE1Q6IE81 842 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 CPLX2Q6PUV4 134 aaKnown RBP9.61□□□□□ -0.87
TRIM39-206ENST00000420746 KDM7AQ6ZMT4 941 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 TMEM25Q86YD3 366 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 TMEM86AQ8N2M4 240 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 EID2Q8N6I1 236 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 SKA1Q96BD8 255 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 VCPIP1Q96JH7 1222 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 ZNF560Q96MR9 790 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 TIPINQ9BVW5 301 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 C6orf106Q9H6K1 298 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-206ENST00000420746 MARK1Q9P0L2 795 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 PCDHB1Q9Y5F3 818 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 TMEM131Q92545 1883 aa9.61□□□□□ -0.87
TRIM39-206ENST00000420746 SLC16A4O15374 487 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 SYNCRIPO60506 623 aaKnown RBP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 TSPAN3O60637 253 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 HIP1RO75146 1068 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 MAPTP10636 758 aaKnown RBP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 MBL2P11226 248 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 EPHA8P29322 1005 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 CDC25AP30304 524 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 PNPLA4P41247 253 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 MATR3P43243 847 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 ARRB1P49407 418 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 COPAP53621 1224 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 FOXK1P85037 733 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 MAPK7Q13164 816 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 SHBQ15464 509 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 SFMBT2Q5VUG0 894 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 CDCP2Q5VXM1 449 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 BLOC1S2Q6QNY1 142 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 LAYNQ6UX15 382 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 C4orf50Q6ZRC1 276 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 KANSL1Q7Z3B3 1105 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 SCN4BQ8IWT1 228 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 PDCL2Q8N4E4 241 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 TMEM161BQ8NDZ6 487 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 TNFRSF25Q93038 417 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 BIRC7Q96CA5 298 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 ERLEC1Q96DZ1 483 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 DEPDC7Q96QD5 511 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 ORAI3Q9BRQ5 295 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 ASB7Q9H672 318 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 DDX43Q9NXZ2 648 aaKnown RBP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 WDR35Q9P2L0 1181 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 ORC3Q9UBD5 711 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-206ENST00000420746 TJP2Q9UDY2 1190 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 LRWD1Q9UFC0 647 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 GTF3C4Q9UKN8 822 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 SH3BP1Q9Y3L3 701 aa9.6□□□□□ -0.87
TRIM39-206ENST00000420746 WASH3PC4AMC7 463 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 H0YCG3 227 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 PPFIA2O75334 1257 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 TYRP14679 529 aa9.59□□□□□ -0.87
TRIM39-206ENST00000420746 CPA1P15085 419 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms