RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 C2orf27AQ580R0 203 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 RAB41Q5JT25 222 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 ARHGAP17Q68EM7 881 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 TTI2Q6NXR4 508 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 HTR3DQ70Z44 454 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 CCDC186Q7Z3E2 898 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 KBTBD6Q86V97 674 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 RASSF3Q86WH2 238 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 TTC30AQ86WT1 665 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 TMEM25Q86YD3 366 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 ZNF276Q8N554 614 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 SECISBP2LQ93073 1101 aaKnown RBP11.64□□□□□ -0.55
SSBP3-206ENST00000420121 EXOC4Q96A65 974 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 ACDQ96AP0 544 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 TMEM176AQ96HP8 235 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 PNKPQ96T60 521 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 TSG101Q99816 390 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 FAM124BQ9H5Z6 455 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-206ENST00000420121 SEMA4GQ9NTN9 838 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 EBF1Q9UH73 591 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 NUDT5Q9UKK9 219 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.64□□□□□ -0.55
SSBP3-206ENST00000420121 TULP2O00295 520 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 TRIM24O15164 1050 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 AXIN1O15169 862 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 STX10O60499 249 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 ADH1CP00326 375 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 RARGP13631 454 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 SEC13P55735 322 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 FOXK2Q01167 660 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 LMNB2Q03252 620 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 KDSRQ06136 332 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 CUL2Q13617 745 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 MORC3Q14149 939 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 DCAF17Q5H9S7 520 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-206ENST00000420121 EMC10Q5UCC4 262 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 TCERG1LQ5VWI1 586 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 KLHDC10Q6PID8 442 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 TMEM92Q6UXU6 159 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 Q6ZNB5 142 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 BHLHA9Q7RTU4 235 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-206ENST00000420121 IL17RCQ8NAC3 791 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 CCDC150Q8NCX0 1101 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 LMO3Q8TAP4 145 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 DHTKD1Q96HY7 919 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-206ENST00000420121 ZC3H10Q96K80 434 aaKnown RBP11.63□□□□□ -0.55
SSBP3-206ENST00000420121 HEXIM2Q96MH2 286 aaKnown RBP11.63□□□□□ -0.55
SSBP3-206ENST00000420121 DUSP15Q9H1R2 295 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-206ENST00000420121 SPHK2Q9NRA0 654 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 ARMCX3Q9UH62 379 aaPredicted RBP11.63□□□□□ -0.55
SSBP3-206ENST00000420121 MMP17Q9ULZ9 603 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 USP18Q9UMW8 372 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 SH3BP1Q9Y3L3 701 aa11.63□□□□□ -0.55
SSBP3-206ENST00000420121 MED19A0JLT2 244 aaPredicted RBP11.62□□□□□ -0.55
SSBP3-206ENST00000420121 SGK1O00141 431 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 DCLK1O15075 740 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 PMM2O15305 246 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 ADAM23O75077 832 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 TULP3O75386 442 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 EPN2O95208 641 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 APBB3O95704 486 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 KLKB1P03952 638 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 ATP5C1P36542 298 aaKnown RBP11.62□□□□□ -0.55
SSBP3-206ENST00000420121 FMO5P49326 533 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 ATXN1P54253 815 aaKnown RBP11.62□□□□□ -0.55
SSBP3-206ENST00000420121 MRPS21P82921 87 aaKnown RBP11.62□□□□□ -0.55
SSBP3-206ENST00000420121 GAD2Q05329 585 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 CRY1Q16526 586 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 CSRP2Q16527 193 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 PLK5Q496M5 336 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 FOXR2Q6PJQ5 311 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 PRR23CQ6ZRP0 262 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 CEP68Q76N32 757 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 CACNA2D4Q7Z3S7 1137 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 PIGZQ86VD9 579 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 TTC39CQ8N584 583 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 CCDC33Q8N5R6 958 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 ALLCQ8N6M5 410 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 NAT16Q8N8M0 369 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 ANKRD52Q8NB46 1076 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 LOXL4Q96JB6 756 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 CEP63Q96MT8 703 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 GTPBP4Q9BZE4 634 aaKnown RBP11.62□□□□□ -0.55
SSBP3-206ENST00000420121 UBXN6Q9BZV1 441 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 ZDHHC4Q9NPG8 344 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 ARHGEF4Q9NR80 690 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 CLIC5Q9NZA1 410 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 MARK1Q9P0L2 795 aa11.62□□□□□ -0.55
SSBP3-206ENST00000420121 PRR5-ARHGAP8B1AHC4 643 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 PSMA7O14818 248 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 CACNG3O60359 315 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 GDF9O60383 454 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 STC2O76061 302 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 APODP05090 189 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 CCDC192P0DO97 292 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 TRIM21P19474 475 aaKnown RBP11.61□□□□□ -0.55
SSBP3-206ENST00000420121 TIE1P35590 1138 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 GRIA2P42262 883 aa11.61□□□□□ -0.55
SSBP3-206ENST00000420121 TNFRSF4P43489 277 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms