RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 WBP2Q969T9 261 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 TMX3Q96JJ7 454 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 MMS19Q96T76 1030 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 B3GNT5Q9BYG0 378 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 ZDHHC5Q9C0B5 715 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 SNX25Q9H3E2 840 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 CCSER2Q9H7U1 834 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 IL37Q9NZH6 218 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 SH3BP1Q9Y3L3 701 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 MYO18AQ92614 2054 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 APC2O95996 2303 aa10.83□□□□□ -0.68
TNFAIP3-202ENST00000420009 FAM92AA1XBS5 289 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 GREM1O60565 184 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 PRPF6O94906 941 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 STAU1O95793 577 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 IDEP14735 1019 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 ANO4Q32M45 955 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 GRAMD4Q6IC98 578 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 TOGARAM2Q6ZUX3 1019 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 SV2BQ7L1I2 683 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 OR6B3Q8NGW1 331 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 SCAMP5Q8TAC9 235 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 MDM1Q8TC05 714 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 DNASE2BQ8WZ79 361 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 FOXJ1Q92949 421 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 MRGPRX1Q96LB2 322 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 BBC3Q96PG8 261 aaPredicted RBP10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 SLC6A17Q9H1V8 727 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 DNAJC17Q9NVM6 304 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 MARK1Q9P0L2 795 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 DKK4Q9UBT3 224 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 CCDC39Q9UFE4 941 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 FBXO2Q9UK22 296 aaPredicted RBP10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 PCOLCE2Q9UKZ9 415 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 APOBEC2Q9Y235 224 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 NFE2L3Q9Y4A8 694 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 GCN1Q92616 2671 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 PLXNB3Q9ULL4 1909 aa10.82□□□□□ -0.68
TNFAIP3-202ENST00000420009 PRRT4C9JH25 899 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 GFRA2O00451 464 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 ZBTB24O43167 697 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 DKK1O94907 266 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 CST3P01034 146 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 GNSP15586 552 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 HOXD13P35453 343 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 SLC5A3P53794 718 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 TNNC1P63316 161 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 RABEP1Q15276 862 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 WDR45BQ5MNZ6 344 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 SYCP2LQ5T4T6 812 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 RRAGBQ5VZM2 374 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 PAQR9Q6ZVX9 377 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 SLCO6A1Q86UG4 719 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 FAM35AQ86V20 835 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 RGL4Q8IZJ4 473 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 GLIS3Q8NEA6 775 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 BAHD1Q8TBE0 780 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 KCNK16Q96T55 309 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 TRIM9Q9C026 710 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 XYLT2Q9H1B5 865 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 KIAA1586Q9HCI6 787 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 PANK4Q9NVE7 773 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 TOR4AQ9NXH8 423 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 CACNA2D2Q9NY47 1150 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 HSPBP1Q9NZL4 362 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 GMIPQ9P107 970 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 KIAA1522Q9P206 1035 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 CHORDC1Q9UHD1 332 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 RAXQ9Y2V3 346 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 PCDHB9Q9Y5E1 797 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 RAD54BQ9Y620 910 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 ACACAQ13085 2346 aa10.81□□□□□ -0.68
TNFAIP3-202ENST00000420009 A0A087X0B3 334 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 A0A1B0GTW7 788 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 A8MXQ7 604 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 NEDD8-MDP1E9PL57 170 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 TLR5O60602 858 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 NDUFS2O75306 463 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 CD2BP2O95400 341 aaKnown RBP10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 ZNF883P0CG24 379 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 IRF1P10914 325 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 TYRP14679 529 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 MAOBP27338 520 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 CD6P30203 668 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 TXLNAP40222 546 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 PGFP49763 221 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 PSMD6Q15008 389 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 SNRNP35Q16560 246 aaKnown RBP10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 WDR72Q3MJ13 1102 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 SDE2Q6IQ49 451 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 KIAA1324Q6UXG2 1013 aaKnown RBP10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 CCDC73Q6ZRK6 1079 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 HTR3DQ70Z44 454 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 TMPRSS7Q7RTY8 843 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 METTL3Q86U44 580 aaKnown RBP10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 SCFD1Q8WVM8 642 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 ERLEC1Q96DZ1 483 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 CGRRF1Q99675 332 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 BBS2Q9BXC9 721 aa10.8□□□□□ -0.68
TNFAIP3-202ENST00000420009 GZF1Q9H116 711 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms