RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 DDX56Q9NY93 547 aaKnown RBP14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 STAP1Q9ULZ2 295 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 EFR3BQ9Y2G0 817 aa14.92□□□□□ -0.02
SHMT1P1-201ENST00000419974 TRANK1O15050 2925 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 CUL9Q8IWT3 2517 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 C2orf71A6NGG8 1288 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 GJB6O95452 261 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 CXCL14O95715 111 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 IGLV3-25P01717 112 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 POU2F2P09086 479 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 USP17L7P0C7H9 530 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 PTPN7P35236 360 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 PLD1Q13393 1074 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 MGAT5BQ3V5L5 792 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 BOLA3Q53S33 107 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 BSPRYQ5W0U4 402 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 TMC7Q7Z402 723 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 EMC1Q8N766 993 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 CMASQ8NFW8 434 aaPredicted RBP14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 EXD1Q8NHP7 514 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 FAM71BQ8TC56 605 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 POF1BQ8WVV4 589 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 ALG3Q92685 438 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 KLHL5Q96PQ7 755 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 C17orf80Q9BSJ5 609 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 FBXW11Q9UKB1 542 aa14.91□□□□□ -0.02
SHMT1P1-201ENST00000419974 PIK3R2O00459 728 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 KCNK3O14649 394 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 MDM4O15151 490 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 NCK2O43639 380 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 CSH1P0DML2 217 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 CSH2P0DML3 217 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 RPL17P18621 184 aaKnown RBP14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 ATF6P18850 670 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 YWHAQP27348 245 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 TERF1P54274 439 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 ERVFC1P60507 584 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 CKAP4Q07065 602 aaKnown RBP14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 NNTQ13423 1086 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 CAMK1Q14012 370 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 TAZQ16635 292 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 DDR2Q16832 855 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 MSANTD2Q6P1R3 559 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 SCN4BQ8IWT1 228 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 RCOR2Q8IZ40 523 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 DEFB106AQ8N104 65 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 CEP112Q8N8E3 955 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 PDZD8Q8NEN9 1154 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 SCAMP5Q8TAC9 235 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 KRT35Q92764 455 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 CDK5RAP1Q96SZ6 601 aaKnown RBP14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 NAP1L3Q99457 506 aaPredicted RBP14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 TCF25Q9BQ70 676 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 PLEKHA4Q9H4M7 779 aa14.9□□□□□ -0.02
SHMT1P1-201ENST00000419974 C2CD2LO14523 706 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 TGM5O43548 720 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 ARHGEF15O94989 841 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 SEC24AO95486 1093 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 HMGA1P17096 107 aaKnown RBP14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 IGFBP4P22692 258 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 DNAJB1P25685 340 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 MIPP30301 263 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 HOXA9P31269 272 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 ELF1P32519 619 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 ALDH1A3P47895 512 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 TUBP50607 506 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 ARPP19P56211 112 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 HDAC4P56524 1084 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 TAS2R40P59535 323 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 YWHAGP61981 247 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 MTA1Q13330 715 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 DCAF12L1Q5VU92 463 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 KLHDC10Q6PID8 442 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 CCDC149Q6ZUS6 474 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 CYP4V2Q6ZWL3 525 aaPredicted RBP14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 SCD5Q86SK9 330 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 TTC9BQ8N6N2 239 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 MNS1Q8NEH6 495 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 COG1Q8WTW3 980 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 FAM172AQ8WUF8 416 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 NTAN1Q96AB6 310 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 FAM149B1Q96BN6 582 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 CFAP57Q96MR6 1250 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 PRDM16Q9HAZ2 1276 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 UXTQ9UBK9 157 aaPredicted RBP14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 DPP7Q9UHL4 492 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 USP18Q9UMW8 372 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 PACSIN2Q9UNF0 486 aaPredicted RBP14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 SLC27A5Q9Y2P5 690 aa14.89□□□□□ -0.03
SHMT1P1-201ENST00000419974 MYH10P35580 1976 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 FAM170AA1A519 330 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 SLC38A8A6NNN8 435 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 ZRANB2O95218 330 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 TRUB2O95900 331 aaKnown RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 RDXP35241 583 aaKnown RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 PAFAH1B1P43034 410 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 CLCN4P51793 760 aa14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 ZNF135P52742 658 aaPredicted RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 RNASE9P60153 205 aaKnown RBP14.88□□□□□ -0.03
SHMT1P1-201ENST00000419974 SCAPQ12770 1279 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms