RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PAPLNO95428 1278 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 F13BP05160 661 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 EPHX1P07099 455 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 HOXD13P35453 343 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 AFMP43652 599 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 AARSP49588 968 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 NDUFA8P51970 172 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 NUCB2P80303 420 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 POU5F1Q01860 360 aaKnown RBP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 AUHQ13825 339 aaKnown RBP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 TMEM132DQ14C87 1099 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 POSTNQ15063 836 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 CYP27C1Q4G0S4 372 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 SFRP5Q5T4F7 317 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 LIN9Q5TKA1 542 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 SPATA1Q5VX52 437 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 HEATR6Q6AI08 1181 aaKnown RBP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 SLC8B1Q6J4K2 584 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 ARMCX5Q6P1M9 558 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 LILRA6Q6PI73 481 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 CCDC149Q6ZUS6 474 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 SPATC1Q76KD6 591 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 JAZF1Q86VZ6 243 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 BRSK2Q8IWQ3 736 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 EFCAB13Q8IY85 973 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 ZSWIM2Q8NEG5 633 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 BEST2Q8NFU1 509 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 HDAC7Q8WUI4 952 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 ZNF707Q96C28 371 aaPredicted RBP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 PAGE5Q96GU1 130 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 CBWD1Q9BRT8 395 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 FAM213AQ9BRX8 229 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 RHOBTB2Q9BYZ6 727 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 PLEKHA4Q9H4M7 779 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 ASB7Q9H672 318 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 ZDHHC7Q9NXF8 308 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 RBAKQ9NYW8 714 aaPredicted RBP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 SUSD2Q9UGT4 822 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 PFDN2Q9UHV9 154 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 MUTYHQ9UIF7 546 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 TMA7Q9Y2S6 64 aaKnown RBP7.47□□□□□ -1.21
HMGN1-205ENST00000419378 C2CD2Q9Y426 696 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 CDY1Q9Y6F8 540 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 TSC2P49815 1807 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 UBE4BO95155 1302 aa7.47□□□□□ -1.21
HMGN1-205ENST00000419378 WDFY4Q6ZS81 3184 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 CCDC195A0A1B0GUA6 201 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 PVALEFA0A1B0GWK0 134 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 A0A1W2PQ27 194 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 A0A1W2PQ64 194 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 A0A1W2PQD8 194 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 TLDC2A0PJX2 215 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 GOLGA8IPA6NC78 632 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 GOLGA8JA6NMD2 632 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 PI4K2BG5E9Z4 385 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 M0QZQ0 153 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 EXTL3O43909 919 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 IL18RAPO95256 599 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 CBX7O95931 251 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 LDHAP00338 332 aaKnown RBP7.46□□□□□ -1.22
HMGN1-205ENST00000419378 C8AP07357 584 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 ALADP13716 330 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 OR1D2P34982 312 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 SYKP43405 635 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 ROR1Q01973 937 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 C9orf57Q5W0N0 161 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF280DQ6N043 979 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 CYP26C1Q6V0L0 522 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 DSTYKQ6XUX3 929 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 LILRB2Q8N423 598 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 FSIP1Q8NA03 581 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 TDRD5Q8NAT2 981 aaKnown RBP7.46□□□□□ -1.22
HMGN1-205ENST00000419378 APPL2Q8NEU8 664 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 ST13P5Q8NFI4 369 aaPredicted RBP7.46□□□□□ -1.22
HMGN1-205ENST00000419378 NOC3LQ8WTT2 800 aaKnown RBP7.46□□□□□ -1.22
HMGN1-205ENST00000419378 SCFD1Q8WVM8 642 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 SMG7Q92540 1137 aaKnown RBP7.46□□□□□ -1.22
HMGN1-205ENST00000419378 C1QTNF1Q9BXJ1 281 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 KLHL25Q9H0H3 589 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 GOLPH3LQ9H4A5 285 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 PCIF1Q9H4Z3 704 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 AGPAT3Q9NRZ7 376 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 USP25Q9UHP3 1055 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 FBXL5Q9UKA1 691 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 FBXL21Q9UKT6 434 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 NR2E1Q9Y466 385 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF451Q9Y4E5 1061 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 CLUHO75153 1309 aa7.46□□□□□ -1.22
HMGN1-205ENST00000419378 ANO9A1A5B4 782 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 WDR27A2RRH5 827 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 ANKRD34BA5PLL1 514 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 PRR33A8MZF0 331 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 H7C4K7 107 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 PIRO00625 290 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 KIAA0391O15091 583 aaKnown RBP7.45□□□□□ -1.22
HMGN1-205ENST00000419378 SHOXO15266 292 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 CCL16O15467 120 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 TGFB1I1O43294 461 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 KLRC4O43908 158 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 TBC1D4O60343 1298 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms