RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 CYP24A1Q07973 514 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 LPIN1Q14693 890 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 APOBEC3HQ6NTF7 200 aaKnown RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 CLVS1Q8IUQ0 354 aaPredicted RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 ALLCQ8N6M5 410 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 C12orf50Q8NA57 414 aaPredicted RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 STKLD1Q8NE28 680 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 ZFP28Q8NHY6 868 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 THEGQ9P2T0 379 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 RPL26L1Q9UNX3 145 aaKnown RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 POLRMTO00411 1230 aaKnown RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 PSTPIP1O43586 416 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 MUTP22033 750 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 ETFBP38117 255 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 C1orf220Q5T0J3 134 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 CDHR3Q6ZTQ4 885 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 XPNPEP1Q9NQW7 623 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 ADA2Q9NZK5 511 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 STRNO43815 780 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 TPST1O60507 370 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 KRT38O76015 456 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 PDGFRBP09619 1106 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 PABPC4LP0CB38 370 aaKnown RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 GCAP28676 217 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 RGS7P49802 495 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 ESRRGP62508 458 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 CUL2Q13617 745 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 FLOT2Q14254 428 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 CTC1Q2NKJ3 1217 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 KLHL35Q6PF15 583 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 HOMEZQ8IX15 550 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 ABRAQ8N0Z2 381 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 CPT1BQ92523 772 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 ATP2A3Q93084 1043 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 GLIS2Q9BZE0 524 aaPredicted RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
DDR1-232ENST00000418800 SLC17A6Q9P2U8 582 aa12.12□□□□□ -0.47
DDR1-232ENST00000418800 UBE4BO95155 1302 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 MYH14Q7Z406 1995 aaKnown RBP12.11□□□□□ -0.47
DDR1-232ENST00000418800 TRAFD1O14545 582 aaPredicted RBP12.11□□□□□ -0.47
DDR1-232ENST00000418800 P4HA2O15460 535 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 TMEM63AO94886 807 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 TMEM191BP0C7N4 346 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
DDR1-232ENST00000418800 PCSK6P29122 969 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 NT5C2P49902 561 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 ROR1Q01973 937 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 PABPC1LQ4VXU2 614 aaKnown RBP12.11□□□□□ -0.47
DDR1-232ENST00000418800 PRAMEF18Q5VWM3 479 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 MOXD1Q6UVY6 613 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 IGDCC3Q8IVU1 814 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 NLRP7Q8WX94 980 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 FIZ1Q96SL8 496 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 NUF2Q9BZD4 464 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 POLR3FQ9H1D9 316 aaPredicted RBP12.11□□□□□ -0.47
DDR1-232ENST00000418800 PTTG2Q9NZH5 202 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 TJP2Q9UDY2 1190 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 CLUHO75153 1309 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 COL4A1P02462 1669 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 CACNA1SQ13698 1873 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 TYROBPO43914 113 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 HSPA4LO95757 839 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 CCDC166P0CW27 439 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 EIF4BP23588 611 aaKnown RBP12.11□□□□□ -0.47
DDR1-232ENST00000418800 FDFT1P37268 417 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 RAP1GAPP47736 663 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 ENTPD1P49961 510 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 JAG1P78504 1218 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 ZBTB41Q5SVQ8 909 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 DUS1LQ6P1R4 473 aaKnown RBP12.11□□□□□ -0.47
DDR1-232ENST00000418800 UBA3Q8TBC4 463 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 ADAM32Q8TC27 787 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 ALKBH8Q96BT7 664 aaKnown RBP12.11□□□□□ -0.47
DDR1-232ENST00000418800 NDUFA13Q9P0J0 144 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 PDE4DIPQ5VU43 2346 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 BRCA2P51587 3418 aa12.11□□□□□ -0.47
DDR1-232ENST00000418800 TM9SF1O15321 606 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 MYLK3Q32MK0 819 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 FAM102AQ5T9C2 384 aaPredicted RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 RNASEH2BQ5TBB1 312 aaKnown RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 LAYNQ6UX15 382 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 ZBTB8BQ8NAP8 495 aaPredicted RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 CCNYQ8ND76 341 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 FAM172AQ8WUF8 416 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 DCUN1D1Q96GG9 259 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 APOPT1Q96IL0 206 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 SCYL1Q96KG9 808 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 AGAP3Q96P47 875 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDR1-232ENST00000418800 TBC1D23Q9NUY8 699 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 A0A0B4J269 797 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms