RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 DONSONQ9NYP3 566 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 DPP7Q9UHL4 492 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 USTQ9Y2C2 406 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 RAD54BQ9Y620 910 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 TSC2P49815 1807 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 SCN5AQ14524 2016 aa10.55□□□□□ -0.72
HMGA1P6-201ENST00000418454 MYH10P35580 1976 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 CCDC151A5D8V7 595 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 C3orf70A6NLC5 250 aaPredicted RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 YJEFN3A6XGL0 299 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 ZBBXA8MT70 800 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 NT5C1B-RDH14C9J2C7 533 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 BHMG1C9JSJ3 638 aaPredicted RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 E7ENQ6 273 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 ATP8B1O43520 1251 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 IGLV3-25P01717 112 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 FYNP06241 537 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 USP17L7P0C7H9 530 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 ZDHHC11BP0C7U3 371 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 LINC00271P0C7V0 271 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 CSH1P0DML2 217 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 CSH2P0DML3 217 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 RARAP10276 462 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 CDKN2BP42772 138 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 SSR1P43307 286 aaKnown RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 NR2C2P49116 596 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 CXCR3P49682 368 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 TUBP50607 506 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 SLC5A3P53794 718 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 YWHAGP61981 247 aaKnown RBP eCLIP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 NRG1Q02297 640 aaPredicted RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 PPP2R5DQ14738 602 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 ERCC6LQ2NKX8 1250 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 DCAF6Q58WW2 860 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 BTBD8Q5XKL5 378 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 TRNP1Q6NT89 227 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 MSANTD2Q6P1R3 559 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 BBS12Q6ZW61 710 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 TAS1R1Q7RTX1 841 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 TMEM173Q86WV6 379 aaPredicted RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 IFT20Q8IY31 132 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 C7orf61Q8IZ16 206 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 EMC1Q8N766 993 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 ATL2Q8NHH9 583 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 BCL7CQ8WUZ0 217 aaPredicted RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 ANKRD7Q92527 254 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 FAM149B1Q96BN6 582 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 FAF2Q96CS3 445 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 C1orf74Q96LT6 269 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 HAPLN3Q96S86 360 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 TMEM209Q96SK2 561 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 PSMB7Q99436 277 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 VN1R3Q9BXE9 311 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 EMILIN2Q9BXX0 1053 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 MAK16Q9BXY0 300 aaKnown RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 UBE2OQ9C0C9 1292 aaKnown RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 RAB17Q9H0T7 212 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 OSBPL2Q9H1P3 480 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 NGRNQ9NPE2 291 aaKnown RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 TLR8Q9NR97 1041 aaKnown RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 RBM12Q9NTZ6 932 aaKnown RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 ABI2Q9NYB9 513 aaPredicted RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 UXTQ9UBK9 157 aaPredicted RBP10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 FBXW11Q9UKB1 542 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 CDY1Q9Y6F8 540 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 TET1Q8NFU7 2136 aa10.54□□□□□ -0.72
HMGA1P6-201ENST00000418454 PCNTO95613 3336 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 hCG_1818297A0A087WSY0 165 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 TLL1O43897 1013 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 ERLIN1O75477 346 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 FGF18O76093 207 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 GJB6O95452 261 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 RALAP11233 206 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 NCAM1P13591 858 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 TGM2P21980 687 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 IL1R2P27930 398 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 STIP1P31948 543 aaKnown RBP10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 OR1D2P34982 312 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 ADRA1BP35368 520 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 CACNA2D1P54289 1103 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 ROR1Q01973 937 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 DEUP1Q05D60 604 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 CUL1Q13616 776 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 TAF5Q15542 800 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 MAP9Q49MG5 647 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 PABPC1LQ4VXU2 614 aaKnown RBP10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 C8orf74Q6P047 294 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 RSPO2Q6UXX9 243 aaPredicted RBP10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 C4orf22Q6V702 233 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 RNF19BQ6ZMZ0 732 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 ITIH5Q86UX2 942 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 VPS52Q8N1B4 723 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 PRELID2Q8N945 189 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 TSC1Q92574 1164 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 NKD2Q969F2 451 aaPredicted RBP10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 CFAP57Q96MR6 1250 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 SERPINB11Q96P15 392 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 TSPYL1Q9H0U9 437 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 ZBP1Q9H171 429 aa10.53□□□□□ -0.72
HMGA1P6-201ENST00000418454 SMOC2Q9H3U7 446 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms