RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 RIN2Q8WYP3 895 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-205ENST00000417664 P3H4Q92791 437 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 NPY6RQ99463 290 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 FAM118BQ9BPY3 351 aa17.5■□□□□ 0.39
SSBP3-205ENST00000417664 GOLGA6CA6NDK9 693 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 HHLA1C9JL84 531 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 SMAPO00193 183 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 ZBED1O96006 694 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 GOLGA6DP0CG33 693 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 IL4RP24394 825 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 SULT1E1P49888 294 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 NOMO1Q15155 1222 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 TERF2Q15554 542 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 TRIP13Q15645 432 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-205ENST00000417664 RAB6CQ53S08 254 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 ANKRD20A8PQ5CZ79 823 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 SLC9A4Q6AI14 798 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 PM20D1Q6GTS8 502 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 BEND5Q7L4P6 421 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 RELL1Q8IUW5 271 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 HASPINQ8TF76 798 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 EXOC4Q96A65 974 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 PGAP3Q96FM1 320 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-205ENST00000417664 TOX2Q96NM4 488 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 ULBP1Q9BZM6 244 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 RAB6CQ9H0N0 254 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 GOLGA6AQ9NYA3 693 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 ADAM21Q9UKJ8 722 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 AP4E1Q9UPM8 1137 aa17.49■□□□□ 0.39
SSBP3-205ENST00000417664 SGK1O00141 431 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 DNALI1O14645 258 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 APOL1O14791 398 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 ITGB1P05556 798 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 MYZAPP0CAP1 466 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 L1CAMP32004 1257 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 OR1G1P47890 313 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 NDUFV1P49821 464 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 EIF3EP60228 445 aaKnown RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 MORF4L2Q15014 288 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 MTFR1Q15390 333 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 IZUMO3Q5VZ72 239 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 DENND2CQ68D51 928 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 HIBCHQ6NVY1 386 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 DCP1BQ8IZD4 617 aaKnown RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 RSAD2Q8WXG1 361 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 HAUS1Q96CS2 278 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 KCNK16Q96T55 309 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 TMEM121Q9BTD3 319 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 MRPL9Q9BYD2 267 aaKnown RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 LRFN2Q9ULH4 789 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 CFAP69A5D8W1 941 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 DCDC2CA8MYV0 355 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 HMGB1P1B2RPK0 211 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 CAPN9O14815 690 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 F9P00740 461 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 CXCL10P02778 98 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 LTFP02788 710 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 RBP3P10745 1247 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 TFE3P19532 575 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 NR2C2P49116 596 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 BCAR1P56945 870 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 MMRN1Q13201 1228 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 P3H1Q32P28 736 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 ZC3H12AQ5D1E8 599 aaKnown RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 CEP85LQ5SZL2 805 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 C1orf53Q5VUE5 145 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 PLD5Q8N7P1 536 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 OR10T2Q8NGX3 314 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 TMEM51Q9NW97 253 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 PSD3Q9NYI0 1048 aa17.48■□□□□ 0.39
SSBP3-205ENST00000417664 TPX2Q9ULW0 747 aaKnown RBP17.48■□□□□ 0.39
SSBP3-205ENST00000417664 PQBP1O60828 265 aaKnown RBP17.47■□□□□ 0.39
SSBP3-205ENST00000417664 TADA2AO75478 443 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 BDNFP23560 247 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 NFE2Q16621 373 aaPredicted RBP17.47■□□□□ 0.39
SSBP3-205ENST00000417664 KCTD19Q17RG1 926 aaPredicted RBP17.47■□□□□ 0.39
SSBP3-205ENST00000417664 SPATA2LQ8IUW3 424 aaPredicted RBP17.47■□□□□ 0.39
SSBP3-205ENST00000417664 ZCCHC9Q8N567 271 aaKnown RBP17.47■□□□□ 0.39
SSBP3-205ENST00000417664 FAM76AQ8TAV0 307 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 NTAN1Q96AB6 310 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 FUBP3Q96I24 572 aaKnown RBP eCLIP17.47■□□□□ 0.39
SSBP3-205ENST00000417664 CASD1Q96PB1 797 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 COLEC11Q9BWP8 271 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 PHACTR1Q9C0D0 580 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 CRISPLD2Q9H0B8 497 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 HIPK3Q9H422 1215 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 DHX35Q9H5Z1 703 aaKnown RBP17.47■□□□□ 0.39
SSBP3-205ENST00000417664 FAM204AQ9H8W3 233 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 TMBIM4Q9HC24 238 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 SAE1Q9UBE0 346 aaPredicted RBP17.47■□□□□ 0.39
SSBP3-205ENST00000417664 FZD10Q9ULW2 581 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 SHOC2Q9UQ13 582 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 USP3Q9Y6I4 520 aa17.47■□□□□ 0.39
SSBP3-205ENST00000417664 M0QYT0 321 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 NRP1O14786 923 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 B4GALT3O60512 393 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 ALDH2P05091 517 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 ARL4AP40617 200 aa17.46■□□□□ 0.39
SSBP3-205ENST00000417664 VPS41P49754 854 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms