RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ITFG1Q8TB96 612 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 KIAA1524Q8TCG1 905 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 MIPOL1Q8TD10 442 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 ZNF483Q8TF39 744 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 PIGKQ92643 395 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 ELSPBP1Q96BH3 223 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 CAMK1GQ96NX5 476 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 TRMT61BQ9BVS5 477 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 GTPBP2Q9BX10 602 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 SLC12A9Q9BXP2 914 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 GPRC5CQ9NQ84 441 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 TOMM22Q9NS69 142 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 IRAK4Q9NWZ3 460 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 TMEFF2Q9UIK5 374 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 SSX2IPQ9Y2D8 614 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 WDR19Q8NEZ3 1342 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 ZNF532Q9HCE3 1301 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 A0A087WUV0 522 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 A0A1B0GUA9 196 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 TCRBV16S1A1N1A0A5B0 115 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 CLEC18AA5D8T8 446 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ZSCAN9O15535 394 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 SRGAP3O43295 1099 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 SH3BP5O60239 455 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ERLIN1O75477 346 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 MBD4O95243 580 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 RASGRP1O95267 797 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 C1RP00736 705 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 SPATA31D3P0C874 917 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 TGFB3P10600 412 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 VAV1P15498 845 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 H2AFXP16104 143 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 RPL17P18621 184 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ACTN2P35609 894 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 CYP27A1Q02318 531 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 PCBP1Q15365 356 aaKnown RBP eCLIP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 TBC1D25Q3MII6 688 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 PREPLQ4J6C6 727 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 RTP2Q5QGT7 225 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC181Q5TID7 509 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 METTL7BQ6UX53 244 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 CLEC18BQ6UXF7 455 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 SPATA31D4Q6ZUB0 917 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 OTUD6AQ7L8S5 288 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 STRA8Q7Z7C7 330 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 GLRX5Q86SX6 157 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 KIAA1328Q86T90 577 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 TADA2BQ86TJ2 420 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 SLCO6A1Q86UG4 719 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 TSPYL5Q86VY4 417 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ECHDC2Q86YB7 292 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 NAXDQ8IW45 347 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 STK11IPQ8N1F8 1099 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 AFAP1L2Q8N4X5 818 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 CAMKK1Q8N5S9 505 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 CLEC18CQ8NCF0 446 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 DCAF4Q8WV16 495 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ING5Q8WYH8 240 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 RSPH1Q8WYR4 309 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ZBTB10Q96DT7 871 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 RPS6KC1Q96S38 1066 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 BAG1Q99933 345 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 RMI1Q9H9A7 625 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 LRRC4CQ9HCJ2 640 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ZNF334Q9HCZ1 680 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 COL20A1Q9P218 1284 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 KLHL42Q9P2K6 505 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ITGB1BP2Q9UKP3 347 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ST3GAL5Q9UNP4 418 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 GINS2Q9Y248 185 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 NOC2LQ9Y3T9 749 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 BACE2Q9Y5Z0 518 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 FPGT-TNNI3KV9GXZ4 949 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 SPAG17Q6Q759 2223 aa5.96□□□□□ -1.46
ECHDC1-206ENST00000417628 ZNF205O95201 554 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 CRTAMO95727 393 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 TUBB4AP04350 444 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 ASLP04424 464 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 ITGB2P05107 769 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 GALTP07902 379 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 HNRNPA1P09651 372 aaKnown RBP eCLIP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 HARSP12081 509 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 PECAM1P16284 738 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 SLC16A2P36021 539 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 DHPSP49366 369 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 UCNP55089 124 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 MLLT6P55198 1093 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 SLC8A3P57103 927 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 TMPRSS3P57727 454 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 NFKB2Q00653 900 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 G3BP1Q13283 466 aaKnown RBP eCLIP5.95□□□□□ -1.461e-11■■■□□ 15.6
ECHDC1-206ENST00000417628 TESK1Q15569 626 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 GAB4Q2WGN9 574 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 ZSCAN23Q3MJ62 389 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 ACBD5Q5T8D3 534 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 CDKAL1Q5VV42 579 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 TANGO2Q6ICL3 276 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 SLC23A3Q6PIS1 610 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 BTNL9Q6UXG8 535 aa5.95□□□□□ -1.46
ECHDC1-206ENST00000417628 GBP6Q6ZN66 633 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms