RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 NMRK1Q9NWW6 199 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-205ENST00000414879 NCANO14594 1321 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 TRPC5OSA6NMA1 111 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 KRT4P19013 534 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 CYP2F1P24903 491 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 SOX10P56693 466 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 AMHR2Q16671 573 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 FAM171A1Q5VUB5 890 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 ANO5Q75V66 913 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 POLNQ7Z5Q5 900 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 EPS8L1Q8TE68 723 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 ZNF558Q96NG5 402 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 GANQ9H2C0 597 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 UBR2Q8IWV8 1755 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 OR6C75A6NL08 312 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 GOLGA8TH3BQL2 631 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 OPLAHO14841 1288 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 CFLARO15519 480 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 LTFP02788 710 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 CYP1A2P05177 515 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 TSHRP16473 764 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 PTPN1P18031 435 aaKnown RBP12.37□□□□□ -0.43
PTPRF-205ENST00000414879 CYP3A5P20815 502 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 EFEMP1Q12805 493 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 RRP1BQ14684 758 aaKnown RBP12.37□□□□□ -0.43
PTPRF-205ENST00000414879 RBBP7Q16576 425 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 NOA1Q8NC60 698 aaKnown RBP12.37□□□□□ -0.43
PTPRF-205ENST00000414879 IL31RAQ8NI17 732 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 TASP1Q9H6P5 420 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 CRLS1Q9UJA2 301 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 PCDHAC2Q9Y5I4 1007 aa12.37□□□□□ -0.43
PTPRF-205ENST00000414879 SLCO1B7G3V0H7 640 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 APOC4-APOC2K7ER74 178 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 APOC2P02655 101 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 ITGALP20701 1170 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 RAP1GAPP47736 663 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 KCNJ1P48048 391 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 THEMIS2Q5TEJ8 643 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 HELQQ8TDG4 1101 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 NRBF2Q96F24 287 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 USP15Q9Y4E8 981 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-205ENST00000414879 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 PQBP1O60828 265 aaKnown RBP12.36□□□□□ -0.43
PTPRF-205ENST00000414879 VPS26AO75436 327 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 MAPK8P45983 427 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 AARSP49588 968 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTPRF-205ENST00000414879 PPP3CAQ08209 521 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 CBWD6Q4V339 395 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 CBWD3Q5JTY5 395 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 CBWD5Q5RIA9 395 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 PCYOX1LQ8NBM8 494 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 LENG9Q96B70 501 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 TACO1Q9BSH4 297 aaKnown RBP12.36□□□□□ -0.43
PTPRF-205ENST00000414879 PACSIN1Q9BY11 444 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 PCDHA2Q9Y5H9 948 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 MAFBQ9Y5Q3 323 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-205ENST00000414879 SNCAIPQ9Y6H5 919 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 RPS6KL1Q9Y6S9 549 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 BTBD19C9JJ37 291 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 ASMTLO95671 621 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 IL17AQ16552 155 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 KBTBD12Q3ZCT8 623 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 NOMO2Q5JPE7 1267 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 MARC1Q5VT66 337 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 ANKRD52Q8NB46 1076 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 L3MBTL3Q96JM7 780 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-205ENST00000414879 CYP4F11Q9HBI6 524 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 LATS2Q9NRM7 1088 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 PKD2L2Q9NZM6 624 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 Q9Y3F1 56 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 A0A0B4J269 797 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 CA12O43570 354 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 ATP9AO75110 1047 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 FGF19O95750 216 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 POMCP01189 267 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 SERPINF2P08697 491 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 RBP1P09455 135 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 KCNA2P16389 499 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 AKAP5P24588 427 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 CDH17Q12864 832 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 TSHZ1Q6ZSZ6 1077 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 SH3BP5LQ7L8J4 393 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 SLC26A11Q86WA9 606 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 FAM131BQ86XD5 332 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 MIB1Q86YT6 1006 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 ACTL9Q8TC94 416 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 WNT8BQ93098 351 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
PTPRF-205ENST00000414879 NOP53Q9NZM5 478 aaKnown RBP12.36□□□□□ -0.43
PTPRF-205ENST00000414879 RAMP2O60895 175 aa12.35□□□□□ -0.43
PTPRF-205ENST00000414879 MMP3P08254 477 aa12.35□□□□□ -0.43
PTPRF-205ENST00000414879 NPR3P17342 541 aa12.35□□□□□ -0.43
PTPRF-205ENST00000414879 ADIGQ0VDE8 80 aa12.35□□□□□ -0.43
PTPRF-205ENST00000414879 SLC29A2Q14542 456 aa12.35□□□□□ -0.43
PTPRF-205ENST00000414879 HP1BP3Q5SSJ5 553 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-205ENST00000414879 NOP9Q86U38 636 aaKnown RBP12.35□□□□□ -0.43
PTPRF-205ENST00000414879 MIPOL1Q8TD10 442 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms