RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 PER2O15055 1255 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 ZNF185O15231 689 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 GLUD1P00367 558 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 HMGA1P17096 107 aaKnown RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 YWHAQP27348 245 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 IL1R2P27930 398 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 ELF1P32519 619 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 GJC1P36383 396 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 HDAC4P56524 1084 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 YWHAGP61981 247 aaKnown RBP eCLIP10.12□□□□□ -0.79
RIF1-202ENST00000414861 SLC25A11Q02978 314 aaKnown RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 TAF10Q12962 218 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 RPS6KA1Q15418 735 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 ADAM32Q8TC27 787 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 FAM172AQ8WUF8 416 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 FBXO32Q969P5 355 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 PEBP4Q96S96 227 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 TBCBQ99426 244 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 TTLL2Q9BWV7 592 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 FBXO44Q9H4M3 255 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 NUDT5Q9UKK9 219 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 LPXNO60711 386 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 CLASP2O75122 1294 aaKnown RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 URI1O94763 535 aaPredicted RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 RTN3O95197 1032 aaPredicted RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 C8AP07357 584 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 NCAM1P13591 858 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 EPCAMP16422 314 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 SLC1A1P43005 524 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 SSR1P43307 286 aaKnown RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 PTPN9P43378 593 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 RBM10P98175 930 aaKnown RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 CC2D1AQ6P1N0 951 aaPredicted RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 CYP4V2Q6ZWL3 525 aaPredicted RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 KREMEN2Q8NCW0 462 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 NT5C3BQ969T7 300 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 ACSF2Q96CM8 615 aaPredicted RBP10.12□□□□□ -0.79
RIF1-202ENST00000414861 OSBPL9Q96SU4 736 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 NPY6RQ99463 290 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 KLHL11Q9NVR0 708 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 NOTCH4Q99466 2003 aa10.12□□□□□ -0.79
RIF1-202ENST00000414861 TADA3O75528 432 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 MIPP30301 263 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 NOS2P35228 1153 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 ALDH1A3P47895 512 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 SULT1E1P49888 294 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 PEX5P50542 639 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 SMAD3P84022 425 aaKnown RBP10.11□□□□□ -0.79
RIF1-202ENST00000414861 PLD1Q13393 1074 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 SMTNL2Q2TAL5 461 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 SLC25A52Q3SY17 297 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 ATP13A4Q4VNC1 1196 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 AADACL2Q6P093 401 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 BNIPLQ7Z465 357 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 RBM23Q86U06 439 aaKnown RBP10.11□□□□□ -0.79
RIF1-202ENST00000414861 SLC22A17Q8WUG5 538 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 CENPIQ92674 756 aaPredicted RBP10.11□□□□□ -0.79
RIF1-202ENST00000414861 SMARCAL1Q9NZC9 954 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 PCSK1NQ9UHG2 260 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 C5orf42Q9H799 3197 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 BRWD1Q9NSI6 2320 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 SYNJ2BP-COX16A0A087WUM0 186 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 KCNK3O14649 394 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 CAPN9O14815 690 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 CTNNA2P26232 953 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 ZNF211Q13398 564 aaPredicted RBP10.11□□□□□ -0.79
RIF1-202ENST00000414861 TAC4Q86UU9 113 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 MON1AQ86VX9 555 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 DQX1Q8TE96 717 aaKnown RBP10.11□□□□□ -0.79
RIF1-202ENST00000414861 ZNF334Q9HCZ1 680 aaPredicted RBP10.11□□□□□ -0.79
RIF1-202ENST00000414861 MAN1C1Q9NR34 630 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 COX16Q9P0S2 106 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 LCMT1Q9UIC8 334 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 MAFFQ9ULX9 164 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 PCDHA3Q9Y5H8 950 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 MRFAP1Q9Y605 127 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 SAR1BQ9Y6B6 198 aa10.11□□□□□ -0.79
RIF1-202ENST00000414861 MIF4GDA9UHW6 222 aaKnown RBP10.1□□□□□ -0.79
RIF1-202ENST00000414861 M0QYT0 321 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 NRG2O14511 850 aaPredicted RBP10.1□□□□□ -0.79
RIF1-202ENST00000414861 RFPL2O75678 378 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 CSH1P0DML2 217 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 CSH2P0DML3 217 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 KCNT1Q5JUK3 1230 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 BTBD8Q5XKL5 378 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 DNAJB7Q7Z6W7 309 aaPredicted RBP10.1□□□□□ -0.79
RIF1-202ENST00000414861 GOLGA1Q92805 767 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 PSMG2Q969U7 264 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 MS4A14Q96JA4 679 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 CAPZA3Q96KX2 299 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 CEP295NLQ96MC4 621 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 ZWILCHQ9H900 591 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 PIGVQ9NUD9 493 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 STAP1Q9ULZ2 295 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 USP18Q9UMW8 372 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 HCFC2Q9Y5Z7 792 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 CCDC66A2RUB6 948 aa10.1□□□□□ -0.79
RIF1-202ENST00000414861 MDM4O15151 490 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms