RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 VSTM1Q6UX27 236 aa16.79■□□□□ 0.28
CPNE1-208ENST00000414711 OSTM1Q86WC4 334 aa16.79■□□□□ 0.28
CPNE1-208ENST00000414711 NUP58Q9BVL2 599 aa16.79■□□□□ 0.28
CPNE1-208ENST00000414711 PCED1AQ9H1Q7 454 aa16.79■□□□□ 0.28
CPNE1-208ENST00000414711 TM9SF3Q9HD45 589 aa16.79■□□□□ 0.28
CPNE1-208ENST00000414711 ANKMY1Q9P2S6 941 aa16.79■□□□□ 0.28
CPNE1-208ENST00000414711 SH3BP1Q9Y3L3 701 aa16.79■□□□□ 0.28
CPNE1-208ENST00000414711 CACNG3O60359 315 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 LDOC1O95751 146 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-208ENST00000414711 FDPSP14324 419 aaKnown RBP16.78■□□□□ 0.28
CPNE1-208ENST00000414711 ACOT2P49753 483 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 NCKAP1LP55160 1127 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-208ENST00000414711 KCNK18Q7Z418 384 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 GATAD2AQ86YP4 633 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 ADGRF2Q8IZF7 708 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 MYLPFQ96A32 169 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 FAM117AQ9C073 453 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 OSGEPQ9NPF4 335 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 MAGEC2Q9UBF1 373 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-208ENST00000414711 STON1Q9Y6Q2 735 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 NOTCH2Q04721 2471 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 MYH11P35749 1972 aa16.78■□□□□ 0.28
CPNE1-208ENST00000414711 NEDD8-MDP1E9PL57 170 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 TERTO14746 1132 aaKnown RBP16.77■□□□□ 0.28
CPNE1-208ENST00000414711 BDNFP23560 247 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 POLR2BP30876 1174 aaKnown RBP16.77■□□□□ 0.28
CPNE1-208ENST00000414711 CTSKP43235 329 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 NOP14P78316 857 aaKnown RBP16.77■□□□□ 0.28
CPNE1-208ENST00000414711 VAC14Q08AM6 782 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 TAF10Q12962 218 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 ORC1Q13415 861 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 KCNT1Q5JUK3 1230 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 SLC39A4Q6P5W5 647 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 FAM171BQ6P995 826 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 CACUL1Q86Y37 369 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 TMPRSS6Q8IU80 811 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 SNRNP27Q8WVK2 155 aaKnown RBP16.77■□□□□ 0.28
CPNE1-208ENST00000414711 PRCCQ92733 491 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-208ENST00000414711 SIPA1Q96FS4 1042 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 HIC2Q96JB3 615 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 SLITRK1Q96PX8 696 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 XPO6Q96QU8 1125 aaKnown RBP16.77■□□□□ 0.28
CPNE1-208ENST00000414711 DUSP9Q99956 384 aaKnown RBP16.77■□□□□ 0.28
CPNE1-208ENST00000414711 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-208ENST00000414711 LRRK2Q5S007 2527 aa16.77■□□□□ 0.28
CPNE1-208ENST00000414711 DFNA5O60443 496 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 PFKFB2O60825 505 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 ATP2C2O75185 946 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 GLDCP23378 1020 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 LHX1P48742 406 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 PSMC1P62191 440 aaKnown RBP16.76■□□□□ 0.27
CPNE1-208ENST00000414711 NFATC3Q12968 1075 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 ZNF574Q6ZN55 896 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-208ENST00000414711 FAM124AQ86V42 546 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 DHX40Q8IX18 779 aaKnown RBP16.76■□□□□ 0.27
CPNE1-208ENST00000414711 KCNN1Q92952 543 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 BBS2Q9BXC9 721 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 C6orf106Q9H6K1 298 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-208ENST00000414711 CLCA2Q9UQC9 943 aa16.76■□□□□ 0.27
CPNE1-208ENST00000414711 A0A1B0GTQ1 180 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 GABRDO14764 452 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 COCHO43405 550 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 TRAK2O60296 914 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 ACADMP11310 421 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 GP1BBP13224 206 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 TYRP14679 529 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 TRIM29Q14134 588 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 C6orf132Q5T0Z8 1188 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 TDRD10Q5VZ19 366 aaKnown RBP16.75■□□□□ 0.27
CPNE1-208ENST00000414711 ADAT2Q7Z6V5 191 aaKnown RBP16.75■□□□□ 0.27
CPNE1-208ENST00000414711 KCNE4Q8WWG9 221 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 ZNF578Q96N58 590 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-208ENST00000414711 SYT15Q9BQS2 421 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 TRIM9Q9C026 710 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 PDRG1Q9NUG6 133 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 LARSQ9P2J5 1176 aaKnown RBP16.75■□□□□ 0.27
CPNE1-208ENST00000414711 AHCTF1Q8WYP5 2266 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 FLNCQ14315 2725 aa16.75■□□□□ 0.27
CPNE1-208ENST00000414711 PP2D1A8MPX8 630 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 F8VP50 259 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 K7ENM7 598 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 KLK10O43240 276 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 SYNCRIPO60506 623 aaKnown RBP16.74■□□□□ 0.27
CPNE1-208ENST00000414711 ITGB3P05106 788 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 IRF1P10914 325 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 DGKGP49619 791 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 ZNF132P52740 706 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 IFRD2Q12894 506 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-208ENST00000414711 KRT79Q5XKE5 535 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 CACTIN-AS1Q8N1I8 211 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 TOP6BLQ8N6T0 577 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 DCBLD1Q8N8Z6 715 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 IGSF22Q8N9C0 903 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 TSC1Q92574 1164 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 RAB34Q9BZG1 259 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 AGAP1Q9UPQ3 857 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 SNX9Q9Y5X1 595 aa16.74■□□□□ 0.27
CPNE1-208ENST00000414711 ANKRD17O75179 2603 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms