RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ATL3Q6DD88 541 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ADALQ6DHV7 355 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 OGFOD3Q6PK18 319 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ZNF720Q7Z2F6 126 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ZC3H7AQ8IWR0 971 aaKnown RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 CCDC65Q8IXS2 484 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 CEP57L1Q8IYX8 460 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 VPS52Q8N1B4 723 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 NXPE1Q8N323 547 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ZNF655Q8N720 491 aaPredicted RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 IQUBQ8NA54 791 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 PIWIL2Q8TC59 973 aaKnown RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 COG1Q8WTW3 980 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 C18orf25Q96B23 403 aaPredicted RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 PAGE5Q96GU1 130 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 IGSF21Q96ID5 467 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 MEGF10Q96KG7 1140 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 FAM84AQ96KN4 292 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 SNX27Q96L92 541 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ZMAT2Q96NC0 199 aaKnown RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 SMAD5Q99717 465 aaKnown RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 ZFYVE21Q9BQ24 234 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ORAI3Q9BRQ5 295 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 NTPCRQ9BSD7 190 aaKnown RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 MSTO1Q9BUK6 570 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 CCDC94Q9BW85 323 aaPredicted RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 HDAC8Q9BY41 377 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 TRIM8Q9BZR9 551 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 TRIM9Q9C026 710 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 SCAND2PQ9GZW5 306 aaPredicted RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 LMAN2LQ9H0V9 348 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ZBP1Q9H171 429 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 TNMDQ9H2S6 317 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 PCIF1Q9H4Z3 704 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 TLE6Q9H808 572 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 UBE2ZQ9H832 354 aaPredicted RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 C17orf75Q9HAS0 396 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 PTPRHQ9HD43 1115 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 UBN1Q9NPG3 1134 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 LMCD1Q9NZU5 365 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 TUBGCP4Q9UGJ1 667 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 BARX2Q9UMQ3 279 aaPredicted RBP5.29□□□□□ -1.56
VPS41-205ENST00000414632 ATP6V1DQ9Y5K8 247 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 ZMYM2Q9UBW7 1377 aa5.29□□□□□ -1.56
VPS41-205ENST00000414632 BDP1A6H8Y1 2624 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 DENND4AQ7Z401 1863 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 SMIM28A0A1B0GU29 152 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 FRMD3A2A2Y4 597 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 GOLGA8IPA6NC78 632 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 GOLGA8JA6NMD2 632 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 ZNF891A8MT65 544 aaPredicted RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 LACTBL1A8MY62 500 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 H0YCG3 227 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 CBX4O00257 560 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 TBX10O75333 385 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 TADA2AO75478 443 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 CXCL14O95715 111 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 ALDH2P05091 517 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 THP07101 528 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 PYGMP11217 842 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 VAV1P15498 845 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 RPL17P18621 184 aaKnown RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 CMA1P23946 247 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 COL8A1P27658 744 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 ADMP35318 185 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 PPM1AP35813 382 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 SYKP43405 635 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 NDUFV1P49821 464 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 CLCNKBP51801 687 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 TBX4P57082 545 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 KRT17Q04695 432 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 UBE3AQ05086 875 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 DSC1Q08554 894 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 PAK1Q13153 545 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 TUSC3Q13454 348 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 SMC1AQ14683 1233 aaKnown RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 TESK1Q15569 626 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 NAB2Q15742 525 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 L1TD1Q5T7N2 865 aaKnown RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 PRSS55Q6UWB4 352 aaPredicted RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 ZPBP2Q6X784 338 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 FAM43BQ6ZT52 329 aaPredicted RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 C22orf34Q6ZV56 151 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 APBB1IPQ7Z5R6 666 aaPredicted RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 CCDC103Q8IW40 242 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 NELFCDQ8IXH7 590 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 SYCP3Q8IZU3 236 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 VN1R2Q8NFZ6 395 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 PCDH19Q8TAB3 1148 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS41-205ENST00000414632 FEZF2Q8TBJ5 459 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 POMGNT1Q8WZA1 660 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 ERCC4Q92889 916 aaPredicted RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 SAAL1Q96ER3 474 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 TCTN2Q96GX1 697 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 ACAP3Q96P50 834 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 PPP1R10Q96QC0 940 aaKnown RBP5.28□□□□□ -1.56
VPS41-205ENST00000414632 C7orf25Q9BPX7 421 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 TMEM175Q9BSA9 504 aa5.28□□□□□ -1.56
VPS41-205ENST00000414632 YIPF4Q9BSR8 244 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms