RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 FOXN3O00409 490 aaPredicted RBP15.43■□□□□ 0.06
CHD1-202ENST00000414220 CD72P21854 359 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 CTHP32929 405 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 GPD2P43304 727 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 APBA1Q02410 837 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 TNK2Q07912 1038 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 GRSF1Q12849 480 aaKnown RBP eCLIP15.43■□□□□ 0.06
CHD1-202ENST00000414220 EML3Q32P44 896 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 ZSCAN23Q3MJ62 389 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 DGKKQ5KSL6 1271 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 TRIM68Q6AZZ1 485 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 PMF1Q6P1K2 205 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 FMNL3Q8IVF7 1028 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 FAM71AQ8IYT1 594 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 IER2Q9BTL4 223 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 DCLK3Q9C098 648 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 ECT2Q9H8V3 914 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 FAM207AQ9NSI2 230 aaPredicted RBP15.43■□□□□ 0.06
CHD1-202ENST00000414220 PCDHGC3Q9UN70 934 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 FHOD1Q9Y613 1164 aa15.43■□□□□ 0.06
CHD1-202ENST00000414220 GALR2O43603 387 aaPredicted RBP15.42■□□□□ 0.06
CHD1-202ENST00000414220 PI15O43692 258 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 ADH1CP00326 375 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 SERPINC1P01008 464 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 DCNP07585 359 aaKnown RBP15.42■□□□□ 0.06
CHD1-202ENST00000414220 CCDC172P0C7W6 258 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 IRF1P10914 325 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 STAT1P42224 750 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 RPS9P46781 194 aaKnown RBP15.42■□□□□ 0.06
CHD1-202ENST00000414220 PTPN5P54829 565 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 POLR2FP61218 127 aaKnown RBP15.42■□□□□ 0.06
CHD1-202ENST00000414220 EFEMP1Q12805 493 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 PPP2R5DQ14738 602 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 SYCP1Q15431 976 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 PREPLQ4J6C6 727 aaPredicted RBP15.42■□□□□ 0.06
CHD1-202ENST00000414220 IER5LQ5T953 404 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 BSPRYQ5W0U4 402 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 SCD5Q86SK9 330 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 MIB1Q86YT6 1006 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
CHD1-202ENST00000414220 CCDC105Q8IYK2 499 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 DTWD2Q8NBA8 298 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 MSANTD4Q8NCY6 345 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 IPO4Q8TEX9 1081 aaKnown RBP15.42■□□□□ 0.06
CHD1-202ENST00000414220 MIS12Q9H081 205 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 LHX5Q9H2C1 402 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 SYNCQ9H7C4 482 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 HPS4Q9NQG7 708 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 MARCH2Q9P0N8 246 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 GREB1Q4ZG55 1949 aa15.42■□□□□ 0.06
CHD1-202ENST00000414220 TBX18O95935 607 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 ARSAP15289 507 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 TARSP26639 723 aaKnown RBP15.41■□□□□ 0.06
CHD1-202ENST00000414220 CLCN1P35523 988 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 DAOAP59103 153 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 GAD2Q05329 585 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 DENND1BQ6P3S1 775 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 NUDT18Q6ZVK8 323 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 HTR3DQ70Z44 454 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 ZNF677Q86XU0 584 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 ADGRG2Q8IZP9 1017 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 SYNPOQ8N3V7 929 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 TMEM35BQ8NCS4 154 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 ERGIC2Q96RQ1 377 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 ZSWIM1Q9BR11 485 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 FUCA2Q9BTY2 467 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 NAA15Q9BXJ9 866 aaKnown RBP15.41■□□□□ 0.06
CHD1-202ENST00000414220 KLF16Q9BXK1 252 aaPredicted RBP15.41■□□□□ 0.06
CHD1-202ENST00000414220 LINC00597Q9H2U6 94 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 LMAN1LQ9HAT1 526 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 OSER1Q9NX31 292 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 NUDT5Q9UKK9 219 aa15.41■□□□□ 0.06
CHD1-202ENST00000414220 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
CHD1-202ENST00000414220 SLC12A8A0AV02 714 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 F8VZ95 297 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 CAPN9O14815 690 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 CALCAP01258 141 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 ATP1A3P13637 1013 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 CYP11B1P15538 503 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 DRD1P21728 446 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 GJA4P35212 333 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 CHKAP35790 457 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 SOX9P48436 509 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 ZXDBP98169 803 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 PON2Q15165 354 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 SLC47A2Q86VL8 602 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 CD101Q93033 1021 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 CLDN23Q96B33 292 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 FAM149B1Q96BN6 582 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 PPP1R13BQ96KQ4 1090 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 ZFRQ96KR1 1074 aaKnown RBP15.4■□□□□ 0.06
CHD1-202ENST00000414220 P2RY13Q9BPV8 354 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 SPATA6Q9NWH7 488 aaPredicted RBP15.4■□□□□ 0.06
CHD1-202ENST00000414220 HBS1LQ9Y450 684 aaKnown RBP15.4■□□□□ 0.06
CHD1-202ENST00000414220 DENND4CQ5VZ89 1909 aa15.4■□□□□ 0.06
CHD1-202ENST00000414220 YJEFN3A6XGL0 299 aa15.39■□□□□ 0.05
CHD1-202ENST00000414220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.39■□□□□ 0.05
CHD1-202ENST00000414220 E7ENQ6 273 aa15.39■□□□□ 0.05
CHD1-202ENST00000414220 PIK3R2O00459 728 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms