RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 LENG8Q96PV6 779 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 NUDT22Q9BRQ3 303 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 CRB3Q9BUF7 120 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 KLK15Q9H2R5 256 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 ARPP21Q9UBL0 812 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 ADAM21Q9UKJ8 722 aa4.49□□□□□ -1.69
HMGB1P11-201ENST00000413899 AP4M1O00189 453 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 TMPRSS11DO60235 418 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 WDR47O94967 919 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 NTSR2O95665 410 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 CREB1P16220 341 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 MCM5P33992 734 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 EIF4A1P60842 406 aaKnown RBP4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 PSG6Q00889 435 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 TRIM71Q2Q1W2 868 aaKnown RBP4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 PCID2Q5JVF3 399 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 DENND2CQ68D51 928 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 PGBD2Q6P3X8 592 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 DPY19L3Q6ZPD9 716 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 SLC29A4Q7RTT9 530 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 ENAHQ8N8S7 591 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 MUL1Q969V5 352 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 IL17RBQ9NRM6 502 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 SNX15Q9NRS6 342 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 HELLSQ9NRZ9 838 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 GAR1Q9NY12 217 aaKnown RBP4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 IGSF9Q9P2J2 1179 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 ZNHIT2Q9UHR6 403 aa4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 CCNL1Q9UK58 526 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P11-201ENST00000413899 JTBO76095 146 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 VIPP01282 170 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 FGAP02671 866 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 HNRNPCP07910 306 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 GPD1P21695 349 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 ADRA1DP25100 572 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 DGKQP52824 942 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 ELLP55199 621 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 CYP4F2P78329 520 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 CHAF1AQ13111 956 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 ARHGAP15Q53QZ3 475 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 AKNAD1Q5T1N1 836 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 TMEM63BQ5T3F8 832 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 STRIP1Q5VSL9 837 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 SKAP1Q86WV1 359 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 MYLK4Q86YV6 388 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 FSTL5Q8N475 847 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 LINC01465Q8N7H1 131 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 PNPLA1Q8N8W4 532 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 ZNF527Q8NB42 609 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 IPO4Q8TEX9 1081 aaKnown RBP4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 POF1BQ8WVV4 589 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 REPS1Q96D71 796 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 SNX18Q96RF0 628 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 CPNE5Q9HCH3 593 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 ASB6Q9NWX5 421 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 WNT6Q9Y6F9 365 aa4.47□□□□□ -1.69
HMGB1P11-201ENST00000413899 F5H423 210 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 H7C1Q1 480 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 CES2O00748 559 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 PCDH17O14917 1159 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 NPC1O15118 1278 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 SKAP2O75563 359 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 IGLV2-14P01704 120 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 ITGA5P08648 1049 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 TMEM225BP0DP42 221 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 NPPBP16860 134 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 BMP5P22003 454 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 PDIA3P30101 505 aaKnown RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 DIO1P49895 249 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 HOXA4Q00056 320 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 NHLH1Q02575 133 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 ICA1Q05084 483 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 PTK2BQ14289 1009 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 KCNJ12Q14500 433 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 SPARCL1Q14515 664 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 PUM3Q15397 648 aaKnown RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 ZACNQ401N2 412 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 AASDHQ4L235 1098 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 RNASE12Q5GAN4 147 aaKnown RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 L1TD1Q5T7N2 865 aaKnown RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 FAM90A2PQ658T7 463 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 KIRREL2Q6UWL6 708 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 CLASRPQ8N2M8 674 aaKnown RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 BOLLQ8N9W6 283 aaKnown RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 TERB1Q8NA31 727 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 NGDNQ8NEJ9 315 aaKnown RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 FAM71BQ8TC56 605 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 OVCA2Q8WZ82 227 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 EID2BQ96D98 161 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 VPS50Q96JG6 964 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 RIOX1Q9H6W3 641 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 MGAT4CQ9UBM8 478 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 MAGED2Q9UNF1 606 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 COX11Q9Y6N1 276 aa4.46□□□□□ -1.7
HMGB1P11-201ENST00000413899 GXYLT2A0PJZ3 443 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 TARM1B6A8C7 271 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 SYT5O00445 386 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 PIP5K1BO14986 540 aa4.45□□□□□ -1.7
HMGB1P11-201ENST00000413899 ZSCAN9O15535 394 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms