RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MYO1HQ8N1T3 1032 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 KLRG1Q96E93 195 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 TIMM13Q9Y5L4 95 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-202ENST00000413872 AASDHQ4L235 1098 aaPredicted RBP17.83■□□□□ 0.45
PHRF1-202ENST00000413872 NOA1Q8NC60 698 aaKnown RBP17.83■□□□□ 0.45
PHRF1-202ENST00000413872 YIPF2Q9BWQ6 316 aa17.83■□□□□ 0.45
PHRF1-202ENST00000413872 TRHDEQ9UKU6 1024 aa17.83■□□□□ 0.45
PHRF1-202ENST00000413872 CBX4O00257 560 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 MICAL2O94851 1124 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 KCNK10P57789 538 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 PPM1LQ5SGD2 360 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 AGGF1Q8N302 714 aaeCLIP17.83■□□□□ 0.448e-7■□□□□ 10.2
PHRF1-202ENST00000413872 TNIP2Q8NFZ5 429 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 WNK4Q96J92 1243 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 PACSIN1Q9BY11 444 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 MANSC1Q9H8J5 431 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 PCDH9Q9HC56 1237 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 ARHGAP26Q9UNA1 814 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 CAPN6Q9Y6Q1 641 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 SPACA6W5XKT8 324 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 SPATA31C2B4DYI2 1134 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 ADCY6O43306 1168 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 HNRNPH2P55795 449 aaKnown RBP17.83■□□□□ 0.44
PHRF1-202ENST00000413872 GTF2BQ00403 316 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 MAP3K10Q02779 954 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 TMEM199Q8N511 208 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 ICA1LQ8NDH6 482 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 CXorf38Q8TB03 319 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 ZIM3Q96PE6 472 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 BCL9LQ86UU0 1499 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 LOC102724159A0A0B4J2E5 919 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 RTP1P59025 263 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 PWP2Q15269 919 aaKnown RBP17.83■□□□□ 0.44
PHRF1-202ENST00000413872 DENND1BQ6P3S1 775 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 TRPM4Q8TD43 1214 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 RBBP8Q99708 897 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 ADAM33Q9BZ11 813 aa17.83■□□□□ 0.44
PHRF1-202ENST00000413872 EVPLLA8MZ36 301 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 PTPN7P35236 360 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 SLC6A3Q01959 620 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 KDSRQ06136 332 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 KBTBD12Q3ZCT8 623 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 CXCL17Q6UXB2 119 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 CCDC149Q6ZUS6 474 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 FBXO36Q8NEA4 188 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 SENP8Q96LD8 212 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 ATRNO75882 1429 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 ENO1P06733 434 aaKnown RBP17.82■□□□□ 0.44
PHRF1-202ENST00000413872 SMIM10L2AP0DMW4 78 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 SMIM10L2BP0DMW5 78 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 ACAT1P24752 427 aaKnown RBP17.82■□□□□ 0.44
PHRF1-202ENST00000413872 TMEM259Q4ZIN3 620 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 SUGP1Q8IWZ8 645 aaKnown RBP17.82■□□□□ 0.44
PHRF1-202ENST00000413872 C3orf20Q8ND61 904 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 ATG4AQ8WYN0 398 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 ILKAPQ9H0C8 392 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-202ENST00000413872 NT5MQ9NPB1 228 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 RBM22Q9NW64 420 aaKnown RBP eCLIP17.82■□□□□ 0.445e-8■■■■■ 27.2
PHRF1-202ENST00000413872 UBR1Q8IWV7 1749 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 CYP2C18P33260 490 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 GAD1Q99259 594 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 FICDQ9BVA6 458 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 PRKD2Q9BZL6 878 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 ZCCHC17Q9NP64 241 aaKnown RBP17.82■□□□□ 0.44
PHRF1-202ENST00000413872 RBP1P09455 135 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 ITGA9Q13797 1035 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 SLC2A14Q8TDB8 520 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 ZNF558Q96NG5 402 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 NMRK2Q9NPI5 230 aa17.82■□□□□ 0.44
PHRF1-202ENST00000413872 PMS1P54277 932 aaKnown RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 E2F4Q16254 413 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 DSG4Q86SJ6 1040 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 SH2D3CQ8N5H7 860 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 ACTL9Q8TC94 416 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 DUSP9Q99956 384 aaKnown RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 ATXN3LQ9H3M9 355 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 WARS2Q9UGM6 360 aaKnown RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 RNF112Q9ULX5 631 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 MRC1P22897 1456 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 GLP2RO95838 553 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 GLRA2P23416 452 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 MZF1P28698 734 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 HPCAP84074 193 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 NFIL3Q16649 462 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 CCT8L2Q96SF2 557 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 VAT1Q99536 393 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 KCTD10Q9H3F6 313 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 OSGEPQ9NPF4 335 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 ANXA11P50995 505 aaKnown RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 TP53BP2Q13625 1128 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 ERAP2Q6P179 960 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 POPDC2Q9HBU9 364 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 LNPEPQ9UIQ6 1025 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 SYNDIG1LA6NDD5 238 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 HACD1B0YJ81 288 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 HNRNPRO43390 633 aaKnown RBP17.81■□□□□ 0.44
PHRF1-202ENST00000413872 MAPK1P28482 360 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 ANKRD23Q86SG2 305 aa17.81■□□□□ 0.44
PHRF1-202ENST00000413872 ARHGEF19Q8IW93 802 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms