RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 F8VP50 259 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 KPNA4O00629 521 aaPredicted RBP14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 RNASEH1O60930 286 aaKnown RBP14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 SRP72O76094 671 aaKnown RBP14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 CCDC130P13994 396 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 ACTR2P61160 394 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 RPS6P62753 249 aaKnown RBP14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 DLG1Q12959 904 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 DPYSL3Q14195 570 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 SLC35G1Q2M3R5 365 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 SEL1L3Q68CR1 1132 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 COA1Q9GZY4 146 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 SLC38A10Q9HBR0 1119 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 COX16Q9P0S2 106 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 ORC6Q9Y5N6 252 aa14.36□□□□□ -0.11
CLTCL1-201ENST00000412649 CHRNB2P17787 502 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 SERPINB1P30740 379 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 OSTNP61366 133 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 STX5Q13190 355 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 ZC3H3Q8IXZ2 948 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 PSPC1Q8WXF1 523 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 NARFQ9UHQ1 456 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 NOCTQ9UK39 431 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 MYH7P12883 1935 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 RGPD8O14715 1765 aaPredicted RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 TRDMT1O14717 391 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 EXTL3O43909 919 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 NEK2P51955 445 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 SLC15A2Q16348 729 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 RNASEH2BQ5TBB1 312 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 C16orf46Q6P387 395 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 INTS5Q6P9B9 1019 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 C4orf22Q6V702 233 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 AMIGO2Q86SJ2 522 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 ADCY4Q8NFM4 1077 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 WRNIP1Q96S55 665 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 NDEL1Q9GZM8 345 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 MRGBPQ9NV56 204 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 GNEQ9Y223 722 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 CFAP99D6REC4 459 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 BIRC5O15392 142 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 BCL10O95999 233 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 PDGFRAP16234 1089 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 ACAT1P24752 427 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 TRPC1P48995 793 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 CCR3P51677 355 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 RGS21Q2M5E4 152 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 TBC1D25Q3MII6 688 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 LRRC38Q5VT99 294 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 RHBDF2Q6PJF5 856 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 ZNF354CQ86Y25 554 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 TDRD5Q8NAT2 981 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 TRPC4APQ8TEL6 797 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 SLC44A1Q8WWI5 657 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 BORCS5Q969J3 196 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 SEMA6AQ9H2E6 1030 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 TASP1Q9H6P5 420 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 KRT82Q9NSB4 513 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 PDLIM1O00151 329 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 TPST1O60507 370 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 CDH3P22223 829 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 PTP4A2Q12974 167 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 PRKD1Q15139 912 aaPredicted RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 LAYNQ6UX15 382 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 POLNQ7Z5Q5 900 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 NCAPG2Q86XI2 1143 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 NRG4Q8WWG1 115 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 PTCD3Q96EY7 689 aaKnown RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 KLHL8Q9P2G9 620 aaPredicted RBP14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 PLLPQ9Y342 182 aa14.35□□□□□ -0.11
CLTCL1-201ENST00000412649 A0A0B4J269 797 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 ZNF839A8K0R7 811 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 MATN2O00339 956 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 AP3M2P53677 418 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 LLGL2Q6P1M3 1020 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 PACS1Q6VY07 963 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 PGBD4Q96DM1 585 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 COX4I2Q96KJ9 171 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 MXRA8Q9BRK3 442 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 TLE6Q9H808 572 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 EURLQ9NYK6 297 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 DOLKQ9UPQ8 538 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 C16orf96A6NNT2 1141 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 OR6B1O95007 311 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 ARP10275 920 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 ITPRIPL1Q6GPH6 555 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 ZSCAN18Q8TBC5 510 aaPredicted RBP14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 DHX35Q9H5Z1 703 aaKnown RBP14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 FETUBQ9UGM5 382 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 hCG_1818297A0A087WSY0 165 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 SFT2D3Q587I9 215 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 RALGPS1Q5JS13 557 aa14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.34□□□□□ -0.11
CLTCL1-201ENST00000412649 SKA1Q96BD8 255 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms