RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CACNA1GO43497 2377 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 ANAPC1Q9H1A4 1944 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 A0A1W2PQF6 199 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 SRRM3A6NNA2 597 aaPredicted RBP17.67■□□□□ 0.42
MRPL55-220ENST00000411464 NEDD8-MDP1E9PL57 170 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 H0Y626 953 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 CUTAO60888 179 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 TRIM16O95361 564 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 SYPP08247 313 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 MIB1Q86YT6 1006 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 FUKQ8N0W3 1084 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 GOLGA5Q8TBA6 731 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 ZCCHC14Q8WYQ9 949 aaKnown RBP17.67■□□□□ 0.42
MRPL55-220ENST00000411464 WBP2Q969T9 261 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 BBS2Q9BXC9 721 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 BLZF1Q9H2G9 400 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 CAPN10Q9HC96 672 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
MRPL55-220ENST00000411464 LSM7Q9UK45 103 aaKnown RBP17.67■□□□□ 0.42
MRPL55-220ENST00000411464 THADAQ6YHU6 1953 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 IGHV1OR15-9A0A0B4J2B8 117 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 PVALEFA0A1B0GWK0 134 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 ARHGAP33O14559 1287 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 POLR2DO15514 142 aaKnown RBP17.66■□□□□ 0.42
MRPL55-220ENST00000411464 NDUFS2O75306 463 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 TBX18O95935 607 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 TYRP14679 529 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 NDUFV2P19404 249 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 TRIM21P19474 475 aaKnown RBP17.66■□□□□ 0.42
MRPL55-220ENST00000411464 ATP5C1P36542 298 aaKnown RBP17.66■□□□□ 0.42
MRPL55-220ENST00000411464 MAP3K7CLP57077 242 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 EHHADHQ08426 723 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 HNRNPDQ14103 355 aaKnown RBP17.66■□□□□ 0.42
MRPL55-220ENST00000411464 BMT2Q1RMZ1 405 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 SGSM1Q2NKQ1 1148 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 EGFLAMQ63HQ2 1017 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 SHC4Q6S5L8 630 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 TPGS1Q6ZTW0 290 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 MINDY1Q8N5J2 469 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 TRIML1Q8N9V2 468 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 SLC2A14Q8TDB8 520 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 PARD3BQ8TEW8 1205 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 IPO4Q8TEX9 1081 aaKnown RBP17.66■□□□□ 0.42
MRPL55-220ENST00000411464 HSPA12BQ96MM6 686 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 ACOX2Q99424 681 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 SMOQ99835 787 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 KLF16Q9BXK1 252 aaPredicted RBP17.66■□□□□ 0.42
MRPL55-220ENST00000411464 FAM124BQ9H5Z6 455 aaPredicted RBP17.66■□□□□ 0.42
MRPL55-220ENST00000411464 CSNK1G1Q9HCP0 422 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.66■□□□□ 0.426e-6■■■■■ 48.1
MRPL55-220ENST00000411464 KLK13Q9UKR3 277 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 HCN2Q9UL51 889 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 CYP8B1Q9UNU6 501 aa17.66■□□□□ 0.42
MRPL55-220ENST00000411464 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.65■□□□□ 0.42
MRPL55-220ENST00000411464 A0A1W2PQD8 194 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 LRRIQ3A6PVS8 624 aaPredicted RBP17.65■□□□□ 0.42
MRPL55-220ENST00000411464 CACNG3O60359 315 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 YEATS4O95619 227 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 C4BPAP04003 597 aaKnown RBP17.65■□□□□ 0.42
MRPL55-220ENST00000411464 CCDC130P13994 396 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 CASP1P29466 404 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 PGFP49763 221 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 CLDN10P78369 228 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 SYCP2LQ5T4T6 812 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 RGL4Q8IZJ4 473 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 CRYBG2Q8N1P7 616 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 ZMIZ2Q8NF64 920 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 PLEKHO2Q8TD55 490 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 ELMO3Q96BJ8 720 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 ERLEC1Q96DZ1 483 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 SDCBP2Q9H190 292 aa17.65■□□□□ 0.42
MRPL55-220ENST00000411464 KIAA1549LQ6ZVL6 1849 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 PRRT4C9JH25 899 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 BEST1O76090 585 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 RPN1P04843 607 aaKnown RBP17.64■□□□□ 0.41
MRPL55-220ENST00000411464 GNSP15586 552 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 DGKGP49619 791 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 NDST1P52848 882 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 ORC1Q13415 861 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 PLEKHG6Q3KR16 790 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 UNC93AQ86WB7 457 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 SLC41A1Q8IVJ1 513 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 GABRG3Q99928 467 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 CYLDQ9NQC7 956 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 FAM49BQ9NUQ9 324 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 MARK1Q9P0L2 795 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 SUSD2Q9UGT4 822 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 MYO16Q9Y6X6 1858 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 NUP205Q92621 2012 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 SPEGQ15772 3267 aa17.64■□□□□ 0.41
MRPL55-220ENST00000411464 HELZP42694 1942 aaKnown RBP17.63■□□□□ 0.41
MRPL55-220ENST00000411464 GREM1O60565 184 aa17.63■□□□□ 0.41
MRPL55-220ENST00000411464 VNN1O95497 513 aa17.63■□□□□ 0.41
MRPL55-220ENST00000411464 FAM200BP0CF97 657 aa17.63■□□□□ 0.41
MRPL55-220ENST00000411464 AFMP43652 599 aa17.63■□□□□ 0.41
MRPL55-220ENST00000411464 SLC14A1Q13336 389 aa17.63■□□□□ 0.41
MRPL55-220ENST00000411464 ZNF423Q2M1K9 1284 aa17.63■□□□□ 0.41
MRPL55-220ENST00000411464 TOGARAM2Q6ZUX3 1019 aa17.63■□□□□ 0.41
MRPL55-220ENST00000411464 CHCHD4Q8N4Q1 142 aa17.63■□□□□ 0.41
MRPL55-220ENST00000411464 C12orf29Q8N999 325 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms