RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 RAB20Q9NX57 234 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 HMGXB4Q9UGU5 601 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 DNMT3LQ9UJW3 386 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 ZNF510Q9Y2H8 683 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 STARD13Q9Y3M8 1113 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
MCF2L-210ENST00000409954 DCHS1Q96JQ0 3298 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 ZBTB24O43167 697 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-210ENST00000409954 OBSL1O75147 1896 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 TULP3O75386 442 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 TBX18O95935 607 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 ADRB1P08588 477 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
MCF2L-210ENST00000409954 RALAP11233 206 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 RARGP13631 454 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 SLC8A3P57103 927 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 COG7P83436 770 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 CREB5Q02930 508 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 GREB1Q4ZG55 1949 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 COBLL1Q53SF7 1204 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 SPDYCQ5MJ68 293 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 STPG1Q5TH74 334 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 SDE2Q6IQ49 451 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 TMEM92Q6UXU6 159 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 CCDC186Q7Z3E2 898 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 C12orf40Q86WS4 652 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 PHTF2Q8N3S3 785 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 TMEM176AQ96HP8 235 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 TWNKQ96RR1 684 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 MMRN2Q9H8L6 949 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.3■□□□□ 0.04
MCF2L-210ENST00000409954 CLIC5Q9NZA1 410 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 HOOK1Q9UJC3 728 aaKnown RBP15.3■□□□□ 0.04
MCF2L-210ENST00000409954 USP3Q9Y6I4 520 aa15.3■□□□□ 0.04
MCF2L-210ENST00000409954 SGK1O00141 431 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 MAP3K13O43283 966 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 GREM1O60565 184 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 SMC2O95347 1197 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 IRF1P10914 325 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 CD58P19256 250 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 PGFP49763 221 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 FKBP3Q00688 224 aaKnown RBP15.29■□□□□ 0.04
MCF2L-210ENST00000409954 MESP2Q0VG99 397 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 CCDC6Q16204 474 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 PPP1R26Q5T8A7 1209 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-210ENST00000409954 ZNF658Q5TYW1 1059 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-210ENST00000409954 PMS2CLQ68D20 193 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 TTC30AQ86WT1 665 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 FMR1NBQ8N0W7 255 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-210ENST00000409954 ARHGAP18Q8N392 663 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 MDGA1Q8NFP4 955 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 TSG101Q99816 390 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 TPSD1Q9BZJ3 242 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 OSER1Q9NX31 292 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 MARK1Q9P0L2 795 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 INVSQ9Y283 1065 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 SDK1Q7Z5N4 2213 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 FRYLO94915 3013 aa15.29■□□□□ 0.04
MCF2L-210ENST00000409954 ATG2BQ96BY7 2078 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 A0A1W2PQH9 124 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 KHNYNO15037 678 aaKnown RBP15.28■□□□□ 0.04
MCF2L-210ENST00000409954 NTSR1P30989 418 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 CHKAP35790 457 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 P2RY2P41231 377 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 DPP6P42658 865 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 PRCPP42785 496 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 MXI1P50539 228 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 NUCB2P80303 420 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 BECN1Q14457 450 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 ZNF394Q53GI3 561 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 C10orf120Q5SQS8 335 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 RNF43Q68DV7 783 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 ARHGAP17Q68EM7 881 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 GRAMD4Q6IC98 578 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 LPCAT2Q7L5N7 544 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 GPRIN1Q7Z2K8 1008 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 PGBD3Q8N328 593 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 ZNF513Q8N8E2 541 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-210ENST00000409954 TERB1Q8NA31 727 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 ANKRD52Q8NB46 1076 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 WBP2Q969T9 261 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 SPACA7Q96KW9 195 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 BBS2Q9BXC9 721 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 DCLK3Q9C098 648 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 NMUR1Q9HB89 426 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 GDPD2Q9HCC8 539 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 CISHQ9NSE2 258 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 BCCIPQ9P287 314 aaKnown RBP eCLIP15.28■□□□□ 0.04
MCF2L-210ENST00000409954 NAGPAQ9UK23 515 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 COQ4Q9Y3A0 265 aa15.28■□□□□ 0.04
MCF2L-210ENST00000409954 PTPRDP23468 1912 aa15.27■□□□□ 0.04
MCF2L-210ENST00000409954 ANTXRLA6NF34 631 aa15.27■□□□□ 0.04
MCF2L-210ENST00000409954 SLC16A3O15427 465 aaKnown RBP15.27■□□□□ 0.04
MCF2L-210ENST00000409954 CYP26A1O43174 497 aa15.27■□□□□ 0.04
MCF2L-210ENST00000409954 CACNG3O60359 315 aa15.27■□□□□ 0.04
MCF2L-210ENST00000409954 ADAM23O75077 832 aa15.27■□□□□ 0.04
MCF2L-210ENST00000409954 CHRM1P11229 460 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-210ENST00000409954 TYRP14679 529 aa15.27■□□□□ 0.04
MCF2L-210ENST00000409954 KDSRQ06136 332 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms