RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 VRTNQ9H8Y1 702 aa9.73□□□□□ -0.85
NIF3L1-203ENST00000409129 CHORDC1Q9UHD1 332 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-203ENST00000409129 GTF3C3Q9Y5Q9 886 aa9.73□□□□□ -0.85
NIF3L1-203ENST00000409129 GOLGA4Q13439 2230 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 TNFRSF10BO14763 440 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 KHNYNO15037 678 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 COCHO43405 550 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 KLF8O95600 359 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 ADH5P11766 374 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 HNRNPLP14866 589 aaKnown RBP eCLIP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 CSRP1P21291 193 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 BCKDHBP21953 392 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 GRIA2P42262 883 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 AFMP43652 599 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 CASP4P49662 377 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 CLDN10P78369 228 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 GAD2Q05329 585 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 BIRC3Q13489 604 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 CUL4BQ13620 913 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 ZNF667Q5HYK9 610 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 LY6G5CQ5SRR4 150 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 HECTD3Q5T447 861 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 FOXD4L5Q5VV16 416 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 SNX30Q5VWJ9 437 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 PAQR9Q6ZVX9 377 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 CYP2U1Q7Z449 544 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 C12orf40Q86WS4 652 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 TTC30AQ86WT1 665 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 SCAMP5Q8TAC9 235 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 OLIG1Q8TAK6 271 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 GOLGA5Q8TBA6 731 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 PLEKHO2Q8TD55 490 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 PARD3BQ8TEW8 1205 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 FOXD4L4Q8WXT5 416 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 OTUB2Q96DC9 234 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 LRIG1Q96JA1 1093 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 TNIP3Q96KP6 325 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 ZFRQ96KR1 1074 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 MED10Q9BTT4 135 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 BACH2Q9BYV9 841 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 SMYD3Q9H7B4 428 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 POLMQ9NP87 494 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 TMEM9BQ9NQ34 198 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 ARHGEF4Q9NR80 690 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 COMMD8Q9NX08 183 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 FAM13BQ9NYF5 915 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 IL37Q9NZH6 218 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 PCDHA7Q9UN72 937 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 ATP8B3O60423 1300 aa9.72□□□□□ -0.85
NIF3L1-203ENST00000409129 MYO18BQ8IUG5 2567 aa9.71□□□□□ -0.85
NIF3L1-203ENST00000409129 LRRIQ3A6PVS8 624 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 SGK1O00141 431 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 VNN1O95497 513 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 C4BPAP04003 597 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 ZDHHC11BP0C7U3 371 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 PDIA4P13667 645 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 P2RY2P41231 377 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 KIR2DL1P43626 348 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 ME1P48163 572 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 DHPSP49366 369 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 TUBP50607 506 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 SLC5A3P53794 718 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 FAM193AP78312 1265 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 SCAPQ12770 1279 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 NCOA4Q13772 614 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 ZNF699Q32M78 642 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 FOXD4L6Q3SYB3 417 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 EOGTQ5NDL2 527 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 RESP18Q5W5W9 173 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 BTBD8Q5XKL5 378 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 FOXD4L3Q6VB84 417 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 FAM35AQ86V20 835 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 PHTF2Q8N3S3 785 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 CHCHD4Q8N4Q1 142 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 WHAMMQ8TF30 809 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 RLN3Q8WXF3 142 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 SMARCD1Q96GM5 515 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 DUSP9Q99956 384 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 SDCBP2Q9H190 292 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 CCSER2Q9H7U1 834 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 DMAP1Q9NPF5 467 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 DMAC2Q9NW81 257 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 SH3BP1Q9Y3L3 701 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 HECTD1Q9ULT8 2610 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 CFAP46Q8IYW2 2715 aa9.71□□□□□ -0.86
NIF3L1-203ENST00000409129 PLXND1Q9Y4D7 1925 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 PCDH15Q96QU1 1955 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 FAM92AA1XBS5 289 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 TBC1D3BA6NDS4 549 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 EIF4E1BA6NMX2 242 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 HOXC11O43248 304 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 KLRC4O43908 158 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 ADAM23O75077 832 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 AP1G2O75843 785 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 C1QL1O75973 258 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 CLSTN1O94985 981 aa9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 RPN1P04843 607 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-203ENST00000409129 ZSCAN22P10073 491 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms