RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 FAM124AQ86V42 546 aa5.19□□□□□ -1.58
SCN3A-203ENST00000409101 FAM131BQ86XD5 332 aa5.19□□□□□ -1.58
SCN3A-203ENST00000409101 SPATS2Q86XZ4 545 aaKnown RBP5.19□□□□□ -1.58
SCN3A-203ENST00000409101 KIRREL3Q8IZU9 778 aa5.19□□□□□ -1.58
SCN3A-203ENST00000409101 MYRIPQ8NFW9 859 aa5.19□□□□□ -1.58
SCN3A-203ENST00000409101 BRI3BPQ8WY22 251 aa5.19□□□□□ -1.58
SCN3A-203ENST00000409101 CLDND1Q9NY35 253 aa5.19□□□□□ -1.58
SCN3A-203ENST00000409101 UBA2Q9UBT2 640 aaPredicted RBP5.19□□□□□ -1.58
SCN3A-203ENST00000409101 TDRKHQ9Y2W6 561 aaKnown RBP5.19□□□□□ -1.58
SCN3A-203ENST00000409101 GPSM3Q9Y4H4 160 aa5.19□□□□□ -1.58
SCN3A-203ENST00000409101 ADGRA2Q96PE1 1338 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ARVCFO00192 962 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 TRIM16O95361 564 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 DARSP14868 501 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 GABRR2P28476 465 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SERPINA4P29622 427 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 CARSP49589 748 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 POU4F1Q01851 419 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 NNTQ13423 1086 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 MAPRE2Q15555 327 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 DENND1CQ8IV53 801 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 NUP93Q8N1F7 819 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF507Q8TCN5 953 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SYN2Q92777 582 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PRPF18Q99633 342 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 GPR20Q99678 358 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 POPDC2Q9HBU9 364 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 DRG1Q9Y295 367 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SSU72P8A0A1W2PR75 194 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 NFATC1O95644 943 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 MYL2P10916 166 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 CYP11B1P15538 503 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PLA2G4AP47712 749 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ABCE1P61221 599 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 FMR1Q06787 632 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PKN1Q16512 942 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SGO1Q5FBB7 561 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 MARC1Q5VT66 337 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 TRIM65Q6PJ69 517 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 BTNL9Q6UXG8 535 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 LBX2Q6XYB7 198 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 MAP4K3Q8IVH8 894 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 RFWD2Q8NHY2 731 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 GRIN3AQ8TCU5 1115 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 TAS1R2Q8TE23 839 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ARL8AQ96BM9 186 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 CYTH2Q99418 400 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 CNPY3Q9BT09 278 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 BBS2Q9BXC9 721 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 OSBPL8Q9BZF1 889 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PTCH2Q9Y6C5 1203 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 TAF6LQ9Y6J9 622 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SPECC1L-ADORA2AF8WAN1 911 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 MGEA5O60502 916 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PYGBP11216 843 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 HTR1BP28222 390 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 AARSP49588 968 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SNRPD1P62314 119 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 YWHAZP63104 245 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 CNKSR3Q6P9H4 555 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 EFL1Q7Z2Z2 1120 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 UNC93AQ86WB7 457 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 CHPFQ8IZ52 775 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SERAC1Q96JX3 654 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 FAM167BQ9BTA0 163 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 DDX47Q9H0S4 455 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 FANCEQ9HB96 536 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 RNF19AQ9NV58 838 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 RNF112Q9ULX5 631 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 TRAF3IP3Q9Y228 551 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 A0A0G2JND7 137 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 DIAPH2O60879 1101 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PCNAP12004 261 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 GRM5P41594 1212 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 GRSF1Q12849 480 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 UBXN2BQ14CS0 331 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 NT5DC3Q86UY8 548 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF655Q8N720 491 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 MAB21L3Q8N8X9 362 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF296Q8WUU4 475 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 RXFP2Q8WXD0 754 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 OR8D1Q8WZ84 308 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 LENG1Q96BZ8 264 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SHDQ96IW2 340 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 TRMT13Q9NUP7 481 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 FBXL5Q9UKA1 691 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 USP18Q9UMW8 372 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SLIT2O94813 1529 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PFKMP08237 780 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 SERPINF2P08697 491 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 OR56A5P0C7T3 313 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 PTPN2P17706 415 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 CYP2A7P20853 494 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 CCND3P30281 292 aaPredicted RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 OR1D2P34982 312 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ANXA11P50995 505 aaKnown RBP5.18□□□□□ -1.58
SCN3A-203ENST00000409101 ACLYP53396 1101 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 KDSRQ06136 332 aa5.18□□□□□ -1.58
SCN3A-203ENST00000409101 XRCC4Q13426 336 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms