RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 TMEM270Q6UE05 265 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 SPOCD1Q6ZMY3 1216 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 DCLK2Q8N568 766 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 BANPQ8N9N5 519 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 PTPRN2Q92932 1015 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 C12orf65Q9H3J6 166 aaKnown RBP17■□□□□ 0.31
CDK11B-204ENST00000407249 ATAD3AQ9NVI7 634 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 SEPT9Q9UHD8 586 aaPredicted RBP17■□□□□ 0.31
CDK11B-204ENST00000407249 COMMD10Q9Y6G5 202 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 NDC80O14777 642 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 PIAS1O75925 651 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 SLC25A27O95847 323 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 EDNRBP24530 442 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 KPNB1Q14974 876 aaKnown RBP17■□□□□ 0.31
CDK11B-204ENST00000407249 LRRC38Q5VT99 294 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 TDRD10Q5VZ19 366 aaKnown RBP17■□□□□ 0.31
CDK11B-204ENST00000407249 CCDC60Q8IWA6 550 aaPredicted RBP17■□□□□ 0.31
CDK11B-204ENST00000407249 UCMAQ8WVF2 138 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 HAUS1Q96CS2 278 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 NSL1Q96IY1 281 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 PAFAH2Q99487 392 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 FAM192AQ9GZU8 254 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 PFDN4Q9NQP4 134 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 DLGAP2Q9P1A6 1054 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 SLC17A7Q9P2U7 560 aa17■□□□□ 0.31
CDK11B-204ENST00000407249 hCG_1818297A0A087WSY0 165 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 TMEM191CA6NGB0 347 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 SGK1O00141 431 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 GYG2O15488 501 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 DNAJC6O75061 913 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 TMEM191BP0C7N4 346 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 PHBP35232 272 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 GAD2Q05329 585 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 ZNF252P-AS1Q0IIN9 211 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 PYROXD1Q8WU10 500 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 ZC3H15Q8WU90 426 aaKnown RBP16.99■□□□□ 0.31
CDK11B-204ENST00000407249 SCG3Q8WXD2 468 aaKnown RBP16.99■□□□□ 0.31
CDK11B-204ENST00000407249 SPATC1LQ9H0A9 340 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 ACSS3Q9H6R3 686 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 MAFBQ9Y5Q3 323 aaPredicted RBP16.99■□□□□ 0.31
CDK11B-204ENST00000407249 POLR2AP24928 1970 aaKnown RBP16.99■□□□□ 0.31
CDK11B-204ENST00000407249 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 GOLGA8RI6L899 631 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 KRT36O76013 467 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 C4BPAP04003 597 aaKnown RBP16.99■□□□□ 0.31
CDK11B-204ENST00000407249 TNNI1P19237 187 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 PLCB3Q01970 1234 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 CUL2Q13617 745 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 MSS51Q4VC12 460 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 TFDP3Q5H9I0 405 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 GADL1Q6ZQY3 521 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 C3orf62Q6ZUJ4 267 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 USP50Q70EL3 339 aaPredicted RBP16.99■□□□□ 0.31
CDK11B-204ENST00000407249 LRRC6Q86X45 466 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 SKA1Q96BD8 255 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 ALKBH8Q96BT7 664 aaKnown RBP16.99■□□□□ 0.31
CDK11B-204ENST00000407249 DRC3Q9H069 523 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 KCNK13Q9HB14 408 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 ZNF302Q9NR11 478 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 PCDHB4Q9Y5E5 795 aa16.99■□□□□ 0.31
CDK11B-204ENST00000407249 F8VP50 259 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 CAPN9O14815 690 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 TBX10O75333 385 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 S100A1P23297 94 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 SERPINB3P29508 390 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 PTPN7P35236 360 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 ARFIP2P53365 341 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 WNT7BP56706 349 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 PDE1BQ01064 536 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 SLC34A1Q06495 639 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 TXNRD3NBQ6F5E7 133 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 VMP1Q96GC9 406 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 MAELQ96JY0 434 aaKnown RBP16.98■□□□□ 0.31
CDK11B-204ENST00000407249 FNBP1Q96RU3 617 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 WDR83Q9BRX9 315 aaKnown RBP16.98■□□□□ 0.31
CDK11B-204ENST00000407249 TSSK1BQ9BXA7 367 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 APOBEC3GQ9HC16 384 aaKnown RBP16.98■□□□□ 0.31
CDK11B-204ENST00000407249 ZNF304Q9HCX3 659 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 FBXO6Q9NRD1 293 aaPredicted RBP16.98■□□□□ 0.31
CDK11B-204ENST00000407249 BTBD7Q9P203 1132 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 KCNH4Q9UQ05 1017 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 VNN1O95497 513 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 SKIP12755 728 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 MMP8P22894 467 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 RFC5P40937 340 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 CDKN2BP42772 138 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 PPIL2Q13356 520 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 KLHL38Q2WGJ6 581 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 FNBP1LQ5T0N5 605 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 FOXB2Q5VYV0 432 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 PCGF5Q86SE9 256 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 SCUBE1Q8IWY4 988 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 SLC35B2Q8TB61 432 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 PRR11Q96HE9 360 aaPredicted RBP16.98■□□□□ 0.31
CDK11B-204ENST00000407249 KLF6Q99612 283 aaPredicted RBP16.98■□□□□ 0.31
CDK11B-204ENST00000407249 ALG13Q9NP73 1137 aaKnown RBP16.98■□□□□ 0.31
CDK11B-204ENST00000407249 TAS2R1Q9NYW7 299 aa16.98■□□□□ 0.31
CDK11B-204ENST00000407249 IGKV6D-21A0A0A0MT36 114 aa16.97■□□□□ 0.31
CDK11B-204ENST00000407249 TTC34A8MYJ7 566 aa16.97■□□□□ 0.31
CDK11B-204ENST00000407249 PSMG1O95456 288 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms