RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 SP3Q02447 781 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 GHRHRQ02643 423 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ADIGQ0VDE8 80 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ITIH4Q14624 930 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ACBD5Q5T8D3 534 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 DUPD1Q68J44 220 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 LCLAT1Q6UWP7 414 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 UNC45BQ8IWX7 931 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 DEFB106AQ8N104 65 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 C4orf33Q8N1A6 199 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 AGGF1Q8N302 714 aaeCLIP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 WNT8BQ93098 351 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PPP2R3CQ969Q6 453 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PABPC5Q96DU9 382 aaKnown RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ZBED3Q96IU2 234 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 MAGEB18Q96M61 343 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 PCDHB18PQ96TA0 734 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 ZBTB18Q99592 522 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 SEZ6LQ9BYH1 1024 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 C20orf96Q9NUD7 363 aaPredicted RBP4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 GPATCH2LQ9NWQ4 482 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 TRPM5Q9NZQ8 1165 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 Q9Y3F1 56 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 NHSQ6T4R5 1651 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 BTAF1O14981 1849 aa4.91□□□□□ -1.62
PCDH11X-207ENST00000406881 CASTOR2A6NHX0 329 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 CCT8L1PA6NM43 557 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 F5H5T6 163 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 F8VP50 259 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TRDMT1O14717 391 aaKnown RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 CHUKO15111 745 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 B4GALT5O43286 388 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 LTFP02788 710 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ITGAVP06756 1048 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ABHD2P08910 425 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 FAM163BP0C2L3 166 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 NPR3P17342 541 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 MBTD1Q05BQ5 628 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 CACNB2Q08289 660 aaPredicted RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 USP10Q14694 798 aaKnown RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 FRA10AC1Q70Z53 315 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ILDR2Q71H61 639 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 LRRC57Q8N9N7 239 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TEKT4Q8WW24 435 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 GAD1Q99259 594 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF670Q9BS34 389 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TRIM54Q9BYV2 358 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 SEMA4AQ9H3S1 761 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 RNPEPQ9H4A4 650 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TLR8Q9NR97 1041 aaKnown RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TBC1D13Q9NVG8 400 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 SUN2Q9UH99 717 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 DCDC2Q9UHG0 476 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 RAD54BQ9Y620 910 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 BAZ2AQ9UIF9 1905 aaKnown RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TRIM66O15016 1216 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TM9SF1O15321 606 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 LIASO43766 372 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 CAND2O75155 1236 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 H2AFYO75367 372 aaKnown RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 KLHL2O95198 593 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ATG7O95352 703 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TRUB2O95900 331 aaKnown RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 CYP1A1P04798 512 aaPredicted RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 PYGLP06737 847 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 NUDT17P0C025 328 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 RFC1P35251 1148 aaPredicted RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 NPY2RP49146 381 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF844Q08AG5 666 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 MGAT5Q09328 741 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 GRIK3Q13003 919 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF177Q13360 481 aaPredicted RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 FAM187BQ17R55 369 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ANKRD20A4Q4UJ75 823 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ANKRD20A8PQ5CZ79 823 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ANKRD20A2Q5SQ80 823 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ANKRD20A1Q5TYW2 823 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ICE2Q659A1 982 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 IL31Q6EBC2 164 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 LVRNQ6Q4G3 990 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 CXCL17Q6UXB2 119 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 NUDT18Q6ZVK8 323 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ZNF572Q7Z3I7 529 aaPredicted RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 SRLQ86TD4 932 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 LRRC49Q8IUZ0 686 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 CCNYL1Q8N7R7 359 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 IPMKQ8NFU5 416 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 MYCBPAPQ8TBZ2 947 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 EPS8L3Q8TE67 593 aaKnown RBP4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 USP33Q8TEY7 942 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 STK32AQ8WU08 396 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 HTR3CQ8WXA8 447 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 CRYGNQ8WXF5 182 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 E2F7Q96AV8 911 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ASIC4Q96FT7 647 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 ADAM2Q99965 735 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 FAM167BQ9BTA0 163 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 NFKBIZQ9BYH8 718 aa4.9□□□□□ -1.62
PCDH11X-207ENST00000406881 TRIM15Q9C019 465 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms