RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 PLEKHO2Q8TD55 490 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 KCNV2Q8TDN2 545 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 OTUB2Q96DC9 234 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 ERLEC1Q96DZ1 483 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 ZNF518BQ9C0D4 1074 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 NXF1Q9UBU9 619 aaKnown RBP22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 COCHO43405 550 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 EXOC3O60645 756 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 NDUFS2O75306 463 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 TACC1O75410 805 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 CST3P01034 146 aaPredicted RBP22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 CASP4P49662 377 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 MINDY1Q8N5J2 469 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 ZNF516Q92618 1163 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 DPEP3Q9H4B8 488 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 DMAC2Q9NW81 257 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 CALCOCO1Q9P1Z2 691 aa22.33■■□□□ 1.17
RHBDD3-202ENST00000406335 ATP8B3O60423 1300 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 PHACTR2O75167 634 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 ZNF217O75362 1048 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 TULP3O75386 442 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 RHOBTB3O94955 611 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 CACNA2D1P54289 1103 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 HNRNPDQ14103 355 aaKnown RBP22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 PIP4P1Q86T03 277 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 CHPFQ8IZ52 775 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 B3GNT5Q9BYG0 378 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 SPHK2Q9NRA0 654 aa22.32■■□□□ 1.16
RHBDD3-202ENST00000406335 UPK3BL1B0FP48 263 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 UPK3BL2E5RIL1 263 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 ARHGAP33O14559 1287 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 FAM163BP0C2L3 166 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 GABRG2P18507 467 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 NTSR1P30989 418 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 GRAMD4Q6IC98 578 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 BBS7Q8IWZ6 715 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 B3GALNT2Q8NCR0 500 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 GOLGA5Q8TBA6 731 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 OVCA2Q8WZ82 227 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 XPO6Q96QU8 1125 aaKnown RBP22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 CYP8B1Q9UNU6 501 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 MAPK8IP1Q9UQF2 711 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 CHD6Q8TD26 2715 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 ABCA7Q8IZY2 2146 aa22.31■■□□□ 1.16
RHBDD3-202ENST00000406335 THADAQ6YHU6 1953 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 FRYQ5TBA9 3013 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 PDXKO00764 312 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 ZNF423Q2M1K9 1284 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 PLEKHG6Q3KR16 790 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 SYCP2LQ5T4T6 812 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 TMEM25Q86YD3 366 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 SLC9A9Q8IVB4 645 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 FMR1NBQ8N0W7 255 aaPredicted RBP22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 TRIML1Q8N9V2 468 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 TERB1Q8NA31 727 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 OR2I1PQ8NGU4 316 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 CCDC47Q96A33 483 aaKnown RBP22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 KCNK16Q96T55 309 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 CCSER2Q9H7U1 834 aa22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 DNAJC17Q9NVM6 304 aaKnown RBP22.3■■□□□ 1.16
RHBDD3-202ENST00000406335 LAMA1P25391 3075 aa22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 HOXC11O43248 304 aaPredicted RBP22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 NR3C1P04150 777 aa22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 GNSP15586 552 aa22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 PNOCQ13519 176 aa22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 PEAR1Q5VY43 1037 aaPredicted RBP22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 SCAMP5Q8TAC9 235 aa22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 PARD3BQ8TEW8 1205 aa22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 HSPA12BQ96MM6 686 aa22.29■■□□□ 1.16
RHBDD3-202ENST00000406335 GOLGA6L4A6NEF3 574 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 LRRIQ3A6PVS8 624 aaPredicted RBP22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 NEDD8-MDP1E9PL57 170 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 MYL6P60660 151 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 FAM193AP78312 1265 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 TRIP6Q15654 476 aaKnown RBP22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 ETFBKMTQ8IXQ9 262 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 PHTF2Q8N3S3 785 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 ENGASEQ8NFI3 743 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 IPO4Q8TEX9 1081 aaKnown RBP22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 SYAP1Q96A49 352 aaPredicted RBP22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 FAM124BQ9H5Z6 455 aaPredicted RBP22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 CAPN10Q9HC96 672 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 GMIPQ9P107 970 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 NME7Q9Y5B8 376 aa22.28■■□□□ 1.16
RHBDD3-202ENST00000406335 IGHV1OR15-9A0A0B4J2B8 117 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 TRIM24O15164 1050 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 SH3BP5O60239 455 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 SLC5A3P53794 718 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 DLG4P78352 724 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 GOLGA8FQ08AF8 430 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 GOLGA8DPQ0D2H9 430 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 BIRC3Q13489 604 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 EGFLAMQ63HQ2 1017 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 CEP135Q66GS9 1140 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 KIAA1324Q6UXG2 1013 aaKnown RBP22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 TPGS1Q6ZTW0 290 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 TMEM174Q8WUU8 243 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 TNIP3Q96KP6 325 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 CAMK1GQ96NX5 476 aa22.27■■□□□ 1.16
RHBDD3-202ENST00000406335 BBS2Q9BXC9 721 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms