RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 UBN1Q9NPG3 1134 aa30.21■■■□□ 2.43
CSNK1E-205ENST00000405675 TPX2Q9ULW0 747 aaKnown RBP30.21■■■□□ 2.43
CSNK1E-205ENST00000405675 MDM4O15151 490 aa30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 B3GAT3O94766 335 aa30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 FAM200BP0CF97 657 aa30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 GRIK3Q13003 919 aa30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 FAM35AQ86V20 835 aa30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 SPATA18Q8TC71 538 aa30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 SMOQ99835 787 aa30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 CAPS2Q9BXY5 557 aa30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.2■■■□□ 2.43
CSNK1E-205ENST00000405675 COL6A1P12109 1028 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 HPDP32754 393 aaPredicted RBP30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 MRPS5P82675 430 aaKnown RBP30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 KYNUQ16719 465 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 ANKRD20A8PQ5CZ79 823 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 C1orf228Q6PIY5 440 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 MAP7D3Q8IWC1 876 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 ZCCHC9Q8N567 271 aaKnown RBP30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 SCLYQ96I15 445 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 TSPYL1Q9H0U9 437 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 HIPK3Q9H422 1215 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 NINJ2Q9NZG7 142 aa30.2■■■□□ 2.42
CSNK1E-205ENST00000405675 SMIM23A6NLE4 172 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 DESP17661 470 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 FAM189BP81408 668 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 TFDP2Q14188 446 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 PLEKHG4Q58EX7 1191 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 RNASEH2BQ5TBB1 312 aaKnown RBP30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 HOOK3Q86VS8 718 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 CCDC185Q8N715 623 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 ZMIZ2Q8NF64 920 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 PCDH19Q8TAB3 1148 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 EPS8L3Q8TE67 593 aaKnown RBP30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 FAM149B1Q96BN6 582 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 KCNK16Q96T55 309 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 FTHL17Q9BXU8 183 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 LRRC4Q9HBW1 653 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 CDH9Q9ULB4 789 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 TLDC2A0PJX2 215 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 F8W810 466 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 AP1G2O75843 785 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 RBP3P10745 1247 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 MATKP42679 507 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 CCL23P55773 120 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 PITX1P78337 314 aaPredicted RBP30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 TUSC3Q13454 348 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 NOMO1Q15155 1222 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 ERMARDQ5T6L9 678 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 OTUD1Q5VV17 481 aaPredicted RBP30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 MYCBPAPQ8TBZ2 947 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 NCAPGQ9BPX3 1015 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 RHOBTB2Q9BYZ6 727 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 PPP1R12CQ9BZL4 782 aa30.19■■■□□ 2.42
CSNK1E-205ENST00000405675 MCF2LO15068 1137 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 TTC4O95801 387 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 ITGB1P05556 798 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 GJA8P48165 433 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 NRLP54845 237 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 PKN2Q16513 984 aaKnown RBP30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 PPP6R3Q5H9R7 873 aaPredicted RBP30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 HFE2Q6ZVN8 426 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 GPRIN1Q7Z2K8 1008 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 PLD5Q8N7P1 536 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 FAM71DQ8N9W8 422 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 RSAD2Q8WXG1 361 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 TLCD1Q96CP7 247 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 TMEM109Q9BVC6 243 aa30.18■■■□□ 2.42
CSNK1E-205ENST00000405675 DAB1O75553 588 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 CAPN15O75808 1086 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 EOMESO95936 686 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 L1CAMP32004 1257 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 RPL22P35268 128 aaKnown RBP30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 TKTL1P51854 596 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 MAGOHP61326 146 aaKnown RBP30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 TCTN1Q2MV58 587 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 TRAF3IP1Q8TDR0 691 aaPredicted RBP30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 ODC1P11926 461 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 IRAK1P51617 712 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 GNGT1P63211 74 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 PPARDQ03181 441 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 ZC3H18Q86VM9 953 aaKnown RBP30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 SIX6OS1Q8N1H7 587 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 P3H4Q92791 437 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 FAF2Q96CS3 445 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 TOX2Q96NM4 488 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 MTMR10Q9NXD2 777 aa30.17■■■□□ 2.42
CSNK1E-205ENST00000405675 TDRD15B5MCY1 1934 aaKnown RBP30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 NRP1O14786 923 aa30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 B4GALT3O60512 393 aa30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 SLCO1A2P46721 670 aa30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 SULT1E1P49888 294 aa30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 YWHAZP63104 245 aaKnown RBP30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 FAM182AQ5T1J6 154 aa30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 RBM15Q96T37 977 aaKnown RBP eCLIP30.16■■■□□ 2.422e-7■■■■■ 39.2
CSNK1E-205ENST00000405675 DHX35Q9H5Z1 703 aaKnown RBP30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 ENPP3O14638 875 aa30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 HSPA1AP0DMV8 641 aaKnown RBP30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 HSPA1BP0DMV9 641 aaKnown RBP30.16■■■□□ 2.42
CSNK1E-205ENST00000405675 ACTN2P35609 894 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms