RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 TMEM110Q86TL2 294 aa15.3■□□□□ 0.04
CDPF1-203ENST00000404583 C1orf131Q8NDD1 294 aaKnown RBP15.3■□□□□ 0.04
CDPF1-203ENST00000404583 TTC8Q8TAM2 541 aa15.3■□□□□ 0.04
CDPF1-203ENST00000404583 PBXIP1Q96AQ6 731 aa15.3■□□□□ 0.04
CDPF1-203ENST00000404583 FAM83CQ9BQN1 747 aa15.3■□□□□ 0.04
CDPF1-203ENST00000404583 ARHGEF3Q9NR81 526 aa15.3■□□□□ 0.04
CDPF1-203ENST00000404583 CLIC5Q9NZA1 410 aa15.3■□□□□ 0.04
CDPF1-203ENST00000404583 TJP2Q9UDY2 1190 aa15.3■□□□□ 0.04
CDPF1-203ENST00000404583 COL4A2P08572 1712 aa15.3■□□□□ 0.04
CDPF1-203ENST00000404583 MYOFQ9NZM1 2061 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 FAM170AA1A519 330 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 E5RJQ4 531 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 SCAMP3O14828 347 aaKnown RBP15.29■□□□□ 0.04
CDPF1-203ENST00000404583 MMEP08473 750 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 PBX1P40424 430 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 PLCB2Q00722 1185 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 BSPRYQ5W0U4 402 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 BTBD8Q5XKL5 378 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 ZNF276Q8N554 614 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 CSGALNACT1Q8TDX6 532 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 SLC20A1Q8WUM9 679 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 BAP1Q92560 729 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 EDEM1Q92611 657 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 DNASE1L2Q92874 299 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 WBP2Q969T9 261 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 PPP1R13BQ96KQ4 1090 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 CPXM1Q96SM3 734 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 KLF16Q9BXK1 252 aaPredicted RBP15.29■□□□□ 0.04
CDPF1-203ENST00000404583 LINC00597Q9H2U6 94 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 EBF3Q9H4W6 596 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 TRPV5Q9NQA5 729 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 GTSE1Q9NYZ3 720 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 CFAP97Q9P2B7 532 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 DNMT3LQ9UJW3 386 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 WNT6Q9Y6F9 365 aa15.29■□□□□ 0.04
CDPF1-203ENST00000404583 PAPSS1O43252 624 aaPredicted RBP15.28■□□□□ 0.04
CDPF1-203ENST00000404583 FBXO21O94952 628 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 IRF1P10914 325 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 ARSAP15289 507 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 CHRNB2P17787 502 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 EFEMP1Q12805 493 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 MLF2Q15773 248 aaPredicted RBP15.28■□□□□ 0.04
CDPF1-203ENST00000404583 KLHDC10Q6PID8 442 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 RSRC2Q7L4I2 434 aaKnown RBP15.28■□□□□ 0.04
CDPF1-203ENST00000404583 BMP8AQ7Z5Y6 402 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 TADA2BQ86TJ2 420 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 OSCP1Q8WVF1 389 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 IRGQQ8WZA9 623 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 CDK5RAP1Q96SZ6 601 aaKnown RBP15.28■□□□□ 0.04
CDPF1-203ENST00000404583 XPO4Q9C0E2 1151 aaKnown RBP15.28■□□□□ 0.04
CDPF1-203ENST00000404583 MFSD1Q9H3U5 465 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 HPS4Q9NQG7 708 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 DUS2Q9NX74 493 aaKnown RBP15.28■□□□□ 0.04
CDPF1-203ENST00000404583 RASAL2Q9UJF2 1139 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 NOCTQ9UK39 431 aaKnown RBP15.28■□□□□ 0.04
CDPF1-203ENST00000404583 F5P12259 2224 aa15.28■□□□□ 0.04
CDPF1-203ENST00000404583 STK25O00506 426 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 LTFP02788 710 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 CD72P21854 359 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 CDH5P33151 784 aaPredicted RBP15.27■□□□□ 0.04
CDPF1-203ENST00000404583 SOX9P48436 509 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 IFNAR2P48551 515 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 FMO1Q01740 532 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 CDR2Q01850 454 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 PTPN20Q4JDL3 420 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 TPRG1Q6ZUI0 275 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDPF1-203ENST00000404583 ZNF677Q86XU0 584 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 MIB1Q86YT6 1006 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 TMEM35BQ8NCS4 154 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 FLCNQ8NFG4 579 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 NOX5Q96PH1 765 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 TTYH3Q9C0H2 523 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 ABCC13Q9NSE7 274 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 SH3BP1Q9Y3L3 701 aa15.27■□□□□ 0.04
CDPF1-203ENST00000404583 OTOL1A6NHN0 477 aaPredicted RBP15.26■□□□□ 0.03
CDPF1-203ENST00000404583 LRRC53A6NM62 1247 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 ERBB2P04626 1255 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 KPNA1P52294 538 aaPredicted RBP15.26■□□□□ 0.03
CDPF1-203ENST00000404583 STARD6P59095 220 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 RUNX3Q13761 415 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 PDGFRLQ15198 375 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 EML3Q32P44 896 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 IRF2BP2Q7Z5L9 587 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 RNF139Q8WU17 664 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 CPA5Q8WXQ8 436 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 GOLGA1Q92805 767 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 FAM149B1Q96BN6 582 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 SHDQ96IW2 340 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 PIWIL1Q96J94 861 aaKnown RBP15.26■□□□□ 0.03
CDPF1-203ENST00000404583 TBC1D17Q9HA65 648 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 MARCH2Q9P0N8 246 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 SFMBT1Q9UHJ3 866 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 MYO6Q9UM54 1294 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 PIAS3Q9Y6X2 628 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 ZDBF2Q9HCK1 2354 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 KMT2EQ8IZD2 1858 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 E2F8A0AVK6 867 aa15.26■□□□□ 0.03
CDPF1-203ENST00000404583 SHISA7A6NL88 538 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms