RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 C1QBPQ07021 282 aaKnown RBP30.76■■■□□ 2.51
USP42-202ENST00000404008 FAM78AQ5JUQ0 283 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 TOGARAM2Q6ZUX3 1019 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 ARL14EPQ8N8R7 260 aaPredicted RBP30.76■■■□□ 2.51
USP42-202ENST00000404008 ASB16Q96NS5 453 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 CYP2S1Q96SQ9 504 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 RNF38Q9H0F5 515 aa30.76■■■□□ 2.51
USP42-202ENST00000404008 NHEJ1Q9H9Q4 299 aaPredicted RBP30.76■■■□□ 2.51
USP42-202ENST00000404008 COCHO43405 550 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 RTN2O75298 545 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 HDCP19113 662 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 FECHP22830 423 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 SLC6A3Q01959 620 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 BTBD8Q5XKL5 378 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 ZDHHC14Q8IZN3 488 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 GOLGA1Q92805 767 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 SMARCD2Q92925 531 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 ABCC13Q9NSE7 274 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 ASNSD1Q9NWL6 643 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 STRIP2Q9ULQ0 834 aa30.75■■■□□ 2.51
USP42-202ENST00000404008 CALB1P05937 261 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 CKMP06732 381 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 RALAP11233 206 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 AVPR1AP37288 418 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 TAF5Q15542 800 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 EFHC1Q5JVL4 640 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 SLC26A9Q7LBE3 791 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 MCOLN2Q8IZK6 566 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 PLCD3Q8N3E9 789 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 CDK5RAP1Q96SZ6 601 aaKnown RBP30.74■■■□□ 2.51
USP42-202ENST00000404008 ISCUQ9H1K1 167 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 DEF6Q9H4E7 631 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 TRPV4Q9HBA0 871 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 NENFQ9UMX5 172 aa30.74■■■□□ 2.51
USP42-202ENST00000404008 FYNP06241 537 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 GLI1P08151 1106 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 SCNN1AP37088 669 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 GSCP56915 257 aaPredicted RBP30.73■■■□□ 2.51
USP42-202ENST00000404008 ZNF268Q14587 947 aaPredicted RBP30.73■■■□□ 2.51
USP42-202ENST00000404008 SLC18A3Q16572 532 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 ARID3BQ8IVW6 561 aaPredicted RBP30.73■■■□□ 2.51
USP42-202ENST00000404008 EDEM1Q92611 657 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 KHSRPQ92945 711 aaKnown RBP eCLIP30.73■■■□□ 2.512e-6■□□□□ 8.4
USP42-202ENST00000404008 FAM149B1Q96BN6 582 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 VCPIP1Q96JH7 1222 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 CCDC42Q96M95 316 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 VCANP13611 3396 aa30.73■■■□□ 2.51
USP42-202ENST00000404008 PRAMEF12O95522 483 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 TBX18O95935 607 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 FTLP02792 175 aaPredicted RBP30.72■■■□□ 2.51
USP42-202ENST00000404008 FCARP24071 287 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 YWHAZP63104 245 aaKnown RBP30.72■■■□□ 2.51
USP42-202ENST00000404008 GFPT1Q06210 699 aaPredicted RBP30.72■■■□□ 2.51
USP42-202ENST00000404008 KLHDC10Q6PID8 442 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 BEND5Q7L4P6 421 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 TADA2BQ86TJ2 420 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 DNAAF5Q86Y56 855 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 TRIM62Q9BVG3 475 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 SMG9Q9H0W8 520 aaKnown RBP30.72■■■□□ 2.51
USP42-202ENST00000404008 POPDC2Q9HBU9 364 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 WDR35Q9P2L0 1181 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 NUDT5Q9UKK9 219 aa30.72■■■□□ 2.51
USP42-202ENST00000404008 AKR1B10O60218 316 aa30.71■■■□□ 2.51
USP42-202ENST00000404008 HSF2BPO75031 334 aa30.71■■■□□ 2.51
USP42-202ENST00000404008 ATP5C1P36542 298 aaKnown RBP30.71■■■□□ 2.51
USP42-202ENST00000404008 GSDMDP57764 484 aa30.71■■■□□ 2.51
USP42-202ENST00000404008 SLC7A9P82251 487 aa30.71■■■□□ 2.51
USP42-202ENST00000404008 C10orf120Q5SQS8 335 aa30.71■■■□□ 2.51
USP42-202ENST00000404008 FAM102AQ5T9C2 384 aaPredicted RBP30.71■■■□□ 2.51
USP42-202ENST00000404008 ALKBH5Q6P6C2 394 aaKnown RBP30.71■■■□□ 2.51
USP42-202ENST00000404008 RSRC2Q7L4I2 434 aaKnown RBP30.71■■■□□ 2.51
USP42-202ENST00000404008 USP13Q92995 863 aaPredicted RBP30.71■■■□□ 2.51
USP42-202ENST00000404008 NACA2Q9H009 215 aa30.71■■■□□ 2.51
USP42-202ENST00000404008 C19orf67A6NJJ6 358 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 ANHXE9PGG2 379 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 GOLGA8SH3BPF8 625 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 HTR4Q13639 388 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 TJAP1Q5JTD0 557 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 PARM1Q6UWI2 310 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 MTSS1LQ765P7 747 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 FGF14Q92915 247 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 OLA1Q9NTK5 396 aaKnown RBP30.7■■■□□ 2.51
USP42-202ENST00000404008 TDP1Q9NUW8 608 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 DNMT3LQ9UJW3 386 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 ARHGAP26Q9UNA1 814 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 CCL26Q9Y258 94 aa30.7■■■□□ 2.51
USP42-202ENST00000404008 GRAP2O75791 330 aa30.69■■■□□ 2.5
USP42-202ENST00000404008 NCAM1P13591 858 aa30.69■■■□□ 2.5
USP42-202ENST00000404008 CCDC122Q5T0U0 273 aa30.69■■■□□ 2.5
USP42-202ENST00000404008 PHLDB2Q86SQ0 1253 aa30.69■■■□□ 2.5
USP42-202ENST00000404008 ST13P5Q8NFI4 369 aaPredicted RBP30.69■■■□□ 2.5
USP42-202ENST00000404008 RNF139Q8WU17 664 aa30.69■■■□□ 2.5
USP42-202ENST00000404008 ANP32BQ92688 251 aaKnown RBP30.69■■■□□ 2.5
USP42-202ENST00000404008 SLC2A13Q96QE2 648 aa30.69■■■□□ 2.5
USP42-202ENST00000404008 NAALADL1Q9UQQ1 740 aa30.69■■■□□ 2.5
USP42-202ENST00000404008 MDM4O15151 490 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 DAB1O75553 588 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 MBL2P11226 248 aaPredicted RBP30.68■■■□□ 2.5
USP42-202ENST00000404008 RRM1P23921 792 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 VIPR2P41587 438 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms