RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ZNF197O14709 1029 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 PSEN1P49768 467 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 SNX30Q5VWJ9 437 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 BTBD8Q5XKL5 378 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 PLEKHA7Q6IQ23 1121 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 ITFG1Q8TB96 612 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 SELENOOQ9BVL4 669 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 CLUHO75153 1309 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 FYNP06241 537 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 TMEM253P0C7T8 217 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 SCNN1AP37088 669 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 MRPS31Q92665 395 aaKnown RBP34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 LUC7LQ9NQ29 371 aaKnown RBP34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 PARVAQ9NVD7 372 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 ASNSD1Q9NWL6 643 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 NUDT5Q9UKK9 219 aa34.87■■■■□ 3.17
CSNK1E-204ENST00000403904 HSF2BPO75031 334 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 GLI1P08151 1106 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 KRT3P12035 628 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 FSHRP23945 695 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 KRT83P78385 493 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 MAMLD1Q13495 774 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 TEAD2Q15562 447 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 STXBP5Q5T5C0 1151 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 TXNDC8Q6A555 127 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 ING5Q8WYH8 240 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 CCSER2Q9H7U1 834 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 POPDC2Q9HBU9 364 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 ABCC13Q9NSE7 274 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 MTPAPQ9NVV4 582 aaKnown RBP eCLIP34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 CLIC5Q9NZA1 410 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 TMEM59LQ9UK28 342 aa34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 USP15Q9Y4E8 981 aaPredicted RBP34.86■■■■□ 3.17
CSNK1E-204ENST00000403904 C2orf78A6NCI8 922 aa34.85■■■■□ 3.17
CSNK1E-204ENST00000403904 RARGP13631 454 aa34.85■■■■□ 3.17
CSNK1E-204ENST00000403904 MTHFRP42898 656 aa34.85■■■■□ 3.17
CSNK1E-204ENST00000403904 TRPC7Q9HCX4 862 aa34.85■■■■□ 3.17
CSNK1E-204ENST00000403904 INTUQ9ULD6 942 aa34.85■■■■□ 3.17
CSNK1E-204ENST00000403904 NAALADL1Q9UQQ1 740 aa34.85■■■■□ 3.17
CSNK1E-204ENST00000403904 ADGRG1Q9Y653 693 aa34.85■■■■□ 3.17
CSNK1E-204ENST00000403904 SIGLEC16A6NMB1 481 aa34.84■■■■□ 3.17
CSNK1E-204ENST00000403904 CYP1A2P05177 515 aa34.84■■■■□ 3.17
CSNK1E-204ENST00000403904 CEBPBP17676 345 aa34.84■■■■□ 3.17
CSNK1E-204ENST00000403904 PPP1R15BQ5SWA1 713 aa34.84■■■■□ 3.17
CSNK1E-204ENST00000403904 EMC1Q8N766 993 aa34.84■■■■□ 3.17
CSNK1E-204ENST00000403904 JOSD2Q8TAC2 188 aa34.84■■■■□ 3.17
CSNK1E-204ENST00000403904 GRXCR2A6NFK2 248 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 CAPN9O14815 690 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 TLR5O60602 858 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 NCAM1P13591 858 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 RPL7AP62424 266 aaKnown RBP34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 HECTD3Q5T447 861 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 SYPL2Q5VXT5 272 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 DEFB106AQ8N104 65 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 SUSD6Q92537 303 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 MCEEQ96PE7 176 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 POMKQ9H5K3 350 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 COG5Q9UP83 839 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 SCINQ9Y6U3 715 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 RCCD1A6NED2 376 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 TBX18O95935 607 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 RALAP11233 206 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 RFC1P35251 1148 aaPredicted RBP34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 FLT3P36888 993 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 CBX2Q14781 532 aaPredicted RBP34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 GPR158Q5T848 1215 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 GET4Q7L5D6 327 aaPredicted RBP34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 KIAA1328Q86T90 577 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 MAB21L3Q8N8X9 362 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 SLC2A13Q96QE2 648 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 MRPL47Q9HD33 250 aaKnown RBP34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 PRDM6Q9NQX0 595 aa34.83■■■■□ 3.17
CSNK1E-204ENST00000403904 UNC80Q8N2C7 3258 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 VAV2P52735 878 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 ARHGAP15Q53QZ3 475 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 DCAF6Q58WW2 860 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 TRNP1Q6NT89 227 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 DCUN1D2Q6PH85 259 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 RSRC2Q7L4I2 434 aaKnown RBP34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 CYP2S1Q96SQ9 504 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 TRIM62Q9BVG3 475 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 NUP85Q9BW27 656 aa34.82■■■■□ 3.16
CSNK1E-204ENST00000403904 MBTPS2O43462 519 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 DAB1O75553 588 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 OAS1P00973 400 aaKnown RBP34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 SMAD4Q13485 552 aaKnown RBP34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 POTEHQ6S545 545 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 RNF139Q8WU17 664 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 NECTIN4Q96NY8 510 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 SLC22A12Q96S37 553 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 SLC46A2Q9BY10 475 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 RNF38Q9H0F5 515 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 SLITRK6Q9H5Y7 841 aa34.81■■■■□ 3.16
CSNK1E-204ENST00000403904 A0A0U1RQJ8 604 aa34.8■■■■□ 3.16
CSNK1E-204ENST00000403904 COCHO43405 550 aa34.8■■■■□ 3.16
CSNK1E-204ENST00000403904 TUBP50607 506 aa34.8■■■■□ 3.16
CSNK1E-204ENST00000403904 C10orf120Q5SQS8 335 aa34.8■■■■□ 3.16
CSNK1E-204ENST00000403904 BEND5Q7L4P6 421 aa34.8■■■■□ 3.16
CSNK1E-204ENST00000403904 ARCQ7LC44 396 aa34.8■■■■□ 3.16
CSNK1E-204ENST00000403904 ATRIPQ8WXE1 791 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms