RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 PTPN9P43378 593 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 ZNF200P98182 395 aaPredicted RBP17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 XRCC4Q13426 336 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 SLC1A5Q15758 541 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 FAM133BQ5BKY9 247 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 MORN1Q5T089 497 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 UBXN11Q5T124 520 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 SLC26A9Q7LBE3 791 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 RTP4Q96DX8 246 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 RAB6BQ9NRW1 208 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 GDAP2Q9NXN4 497 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 GRID1Q9ULK0 1009 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 BCLAF3A2AJT9 711 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 ZNF865P0CJ78 1059 aaPredicted RBP17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 LCP1P13796 627 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 ATP2A2P16615 1042 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 MSH2P43246 934 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 RPL34P49207 117 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 PSEN2P49810 448 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 ATXN1P54253 815 aaKnown RBP17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 BCAT1P54687 386 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 FAM47EQ6ZV65 393 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 C2orf69Q8N8R5 385 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 DCAKDQ8WVC6 231 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 CENPIQ92674 756 aaPredicted RBP17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 GRAMD1AQ96CP6 724 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 TEX264Q9Y6I9 313 aa17.64■□□□□ 0.41
DNMT3A-205ENST00000402667 CFAP69A5D8W1 941 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 HAS3O00219 553 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 UBOX5O94941 541 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 ZBED1O96006 694 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 KCNE1P15382 129 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 SOX4Q06945 474 aaPredicted RBP17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 MAP2K5Q13163 448 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 XKR4Q5GH76 650 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 FUKQ8N0W3 1084 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 MZB1Q8WU39 189 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 ZNF560Q96MR9 790 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 SNX25Q9H3E2 840 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 NRDE2Q9H7Z3 1164 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 GOLGA2P5Q9HBQ8 144 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 KLC4Q9NSK0 619 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 TRIP12Q14669 1992 aaPredicted RBP17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 AVILO75366 819 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 CYP2F1P24903 491 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 L1CAMP32004 1257 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 DNAJC3Q13217 504 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 DPYSL2Q16555 572 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 RGS9BPQ6ZS82 235 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 APPL2Q8NEU8 664 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 LRRN4Q8WUT4 740 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 CYTH2Q99418 400 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 PLCD4Q9BRC7 762 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 MAGEB5Q9BZ81 275 aa17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 SSU72Q9NP77 194 aaKnown RBP17.63■□□□□ 0.41
DNMT3A-205ENST00000402667 PDCD11Q14690 1871 aaKnown RBP17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 ZNF487B1APH4 448 aa17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 XPOTO43592 962 aaKnown RBP17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 CELF2O95319 508 aaKnown RBP17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 SCNN1AP37088 669 aa17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 PNPLA4P41247 253 aa17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 TAF6P49848 677 aa17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 PDK4Q16654 411 aa17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 GALNTL6Q49A17 601 aa17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 ARCQ7LC44 396 aa17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 AGGF1Q8N302 714 aaeCLIP17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 SLC2A14Q8TDB8 520 aa17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 DHX35Q9H5Z1 703 aaKnown RBP17.62■□□□□ 0.41
DNMT3A-205ENST00000402667 TCRBV9S1A1TA0A576 114 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 KBTBD13C9JR72 458 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 CBLBQ13191 982 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 IRF5Q13568 498 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 FAXCQ5TGI0 409 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 LIMS2Q7Z4I7 341 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 CYLDQ9NQC7 956 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 KLHL14Q9P2G3 628 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 MYL3P08590 195 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 ACADSBP45954 432 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 BEX3Q00994 111 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 HHATQ5VTY9 493 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 CYB5D1Q6P9G0 228 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 LVRNQ6Q4G3 990 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 ARRDC4Q8NCT1 418 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 HSFY1Q96LI6 401 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 RMDN2Q96LZ7 410 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 ETNK2Q9NVF9 386 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 MTMR10Q9NXD2 777 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 IPPQ9Y573 584 aa17.61■□□□□ 0.41
DNMT3A-205ENST00000402667 ZNF236Q9UL36 1845 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 ZWINTO95229 277 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 GBP2P32456 591 aaPredicted RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 CRYBB1P53674 252 aaPredicted RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 YWHAGP61981 247 aaKnown RBP eCLIP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 GBE1Q04446 702 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 MGAT5Q09328 741 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 SLC10A2Q12908 348 aaPredicted RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 GPR162Q16538 588 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 CCL14Q16627 93 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms