RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 KAT5Q92993 513 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 WBP2Q969T9 261 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CYFIP2Q96F07 1278 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 DHTKD1Q96HY7 919 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 HEXIM2Q96MH2 286 aaKnown RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 SLITRK1Q96PX8 696 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CDK15Q96Q40 435 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 HNRNPABQ99729 332 aaKnown RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CHRDQ9H2X0 955 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CCSER2Q9H7U1 834 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 FBRSL1Q9HCM7 1045 aaKnown RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CISHQ9NSE2 258 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 C2orf42Q9NWW7 574 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 DUS2Q9NX74 493 aaKnown RBP6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CFAP97Q9P2B7 532 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 ARHGAP26Q9UNA1 814 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 CPQQ9Y646 472 aa6.1□□□□□ -1.43
HMGB1P20-201ENST00000402555 ANTXRLA6NF34 631 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 SOBPA7XYQ1 873 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 HHLA1C9JL84 531 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 PROB1E7EW31 1015 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 TULP2O00295 520 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 MDM4O15151 490 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 CYP26A1O43174 497 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 COCHO43405 550 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 OLFM2O95897 454 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 TBX18O95935 607 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 EGFP01133 1207 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 CALCAP01258 141 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 IRF1P10914 325 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 ACO1P21399 889 aaKnown RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 GJA4P35212 333 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAGEA9P43362 315 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 FMO5P49326 533 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 GALK1P51570 392 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 RAD23BP54727 409 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 MLLT6P55198 1093 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 SLC7A9P82251 487 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 DMWDQ09019 674 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 PAK1Q13153 545 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 NNTQ13423 1086 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 CUL2Q13617 745 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 LRRC32Q14392 662 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 PDGFRLQ15198 375 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 QPCTQ16769 361 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 EML3Q32P44 896 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 FILIP1Q7Z7B0 1213 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 CPA6Q8N4T0 437 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 PDZD8Q8NEN9 1154 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 OSCP1Q8WVF1 389 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 EZH1Q92800 747 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 NKD2Q969F2 451 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 MSANTD3Q96H12 275 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 CEP295NLQ96MC4 621 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 CEP63Q96MT8 703 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 MED15Q96RN5 788 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 KLF16Q9BXK1 252 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 SRRTQ9BXP5 876 aaKnown RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 GTPBP4Q9BZE4 634 aaKnown RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 ECT2Q9H8V3 914 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 NMUR1Q9HB89 426 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 METTL14Q9HCE5 456 aaKnown RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 CSNK1G1Q9HCP0 422 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 PRMT8Q9NR22 394 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 POLR3BQ9NW08 1133 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 OSER1Q9NX31 292 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 IL37Q9NZH6 218 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 EHD2Q9NZN4 543 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 NUDT5Q9UKK9 219 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 COQ4Q9Y3A0 265 aa6.09□□□□□ -1.43
HMGB1P20-201ENST00000402555 A0A1W2PQH9 124 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 BICDL2A1A5D9 508 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 FAM92AA1XBS5 289 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TRDMT1O14717 391 aaKnown RBP6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TLR5O60602 858 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 CYP17A1P05093 508 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 ZDHHC11BP0C7U3 371 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TDGF1P13385 188 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 CD19P15391 556 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TCF3P15923 654 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TIMP2P16035 220 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TRIM21P19474 475 aaKnown RBP6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 PPP1R2P41236 205 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 PPP3CCP48454 512 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 PDE6CP51160 858 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 KIF11P52732 1056 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 MESP2Q0VG99 397 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 GRSF1Q12849 480 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 CCINQ13939 588 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 GOLGA7BQ2TAP0 167 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 GAB4Q2WGN9 574 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TMEM196Q5HYL7 178 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 DGKKQ5KSL6 1271 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 HECTD3Q5T447 861 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 HEATR6Q6AI08 1181 aaKnown RBP6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 RRAGAQ7L523 313 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 SCD5Q86SK9 330 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 PIGZQ86VD9 579 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 C12orf40Q86WS4 652 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TTC30AQ86WT1 665 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms