RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ZMAT2Q96NC0 199 aaKnown RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GAD1Q99259 594 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PHACTR1Q9C0D0 580 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SMG5Q9UPR3 1016 aaKnown RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 EFR3BQ9Y2G0 817 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ALOX15BO15296 676 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 NQO1P15559 274 aaKnown RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 MLH1P40692 756 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 MYL6P60660 151 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 WDR5P61964 334 aaKnown RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 OGDHQ02218 1023 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CCDC15Q0P6D6 951 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TRPC3Q13507 836 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ZKSCAN8Q15776 578 aaPredicted RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RNASEH2BQ5TBB1 312 aaKnown RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 JADE1Q6IE81 842 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PCGF5Q86SE9 256 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ERICH1Q86X53 443 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GLIS1Q8NBF1 620 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TOP1MTQ969P6 601 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 MTMR12Q9C0I1 747 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 NOD2Q9HC29 1040 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 KLHL14Q9P2G3 628 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 LRRD1A4D1F6 860 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PTGESO14684 152 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 AMHP03971 560 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 NFICP08651 508 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ZSCAN5DPP0CG00 497 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 EZRP15311 586 aaKnown RBP16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GCAP28676 217 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GLB1LQ6UWU2 654 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RGS9BPQ6ZS82 235 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TBC1D1Q86TI0 1168 aaPredicted RBP16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RSPH1Q8WYR4 309 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 NCAPGQ9BPX3 1015 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RNF19AQ9NV58 838 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SLC24A2Q9UI40 661 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RALGAPA2Q2PPJ7 1873 aa16.61■□□□□ 0.25
CHRFAM7A-203ENST00000401522 HOXA2O43364 376 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ASMTLO95671 621 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FGFR1P11362 822 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FOXN2P32314 431 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 AFF1P51825 1210 aaKnown RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ZNF268Q14587 947 aaPredicted RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TMEM132DQ14C87 1099 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CLLU1OSQ5K130 101 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CGB2Q6NT52 195 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SLC35B2Q8TB61 432 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 HERVK_113Q902F9 699 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TRABDQ9H4I3 376 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 MIOSQ9NXC5 875 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TRIP11Q15643 1979 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ETS1P14921 441 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 POLR2BP30876 1174 aaKnown RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SKIV2L2P42285 1042 aaKnown RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 WDR4P57081 412 aaKnown RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TFAMQ00059 246 aaKnown RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SPARCL1Q14515 664 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CEP57Q86XR8 500 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 WDTC1Q8N5D0 677 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TTC13Q8NBP0 860 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 DENND1AQ8TEH3 1009 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PRCCQ92733 491 aaPredicted RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PPP1R10Q96QC0 940 aaKnown RBP16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PITPNM3Q9BZ71 974 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 VPS37BQ9H9H4 285 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FETUBQ9UGM5 382 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 BAIAP2L1Q9UHR4 511 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 STARD13Q9Y3M8 1113 aa16.6■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SGK1O00141 431 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 MED7O43513 233 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 THP07101 528 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 KRT7P08729 469 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 DEFB103AP81534 67 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ZNF699Q32M78 642 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 WDR72Q3MJ13 1102 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GLRA4Q5JXX5 417 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TXNRD3NBQ6F5E7 133 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FNIP1Q8TF40 1166 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TFAP2BQ92481 460 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ANKRD36BP1Q96IX9 119 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SMC6Q96SB8 1091 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 LHX5Q9H2C1 402 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SLC38A7Q9NVC3 462 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 KANSL3Q9P2N6 904 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 MCM8Q9UJA3 840 aa16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 UBQLN1Q9UMX0 589 aaKnown RBP16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.59■□□□□ 0.25
CHRFAM7A-203ENST00000401522 C3orf70A6NLC5 250 aaPredicted RBP16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SIGLEC16A6NMB1 481 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 POC1B-GALNT4F8VUJ3 575 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 DGKIO75912 1065 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TNNC2P02585 160 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CYP3A5P20815 502 aa16.58■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PSMA2P25787 234 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms