RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 RALAP11233 206 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 SPRP35270 261 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 EIF6P56537 245 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 ZNF394Q53GI3 561 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 SEL1L3Q68CR1 1132 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 SLFN11Q7Z7L1 901 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 AMIGO2Q86SJ2 522 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 KRT73Q86Y46 540 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CCDC177Q9NQR7 707 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 DNAJC28Q9NX36 388 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 KNDC1Q76NI1 1749 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 ARPC4-TTLL3A0A0A6YYG9 625 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 TYW5A2RUC4 315 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 RNF225M0QZC1 329 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 ITM2AO43736 263 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CD19P15391 556 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 PRIM2P49643 509 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 NFX1Q12986 1120 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 TBCELQ5QJ74 424 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 TWF2Q6IBS0 349 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CCSAPQ6IQ19 270 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 C12orf56Q8IXR9 622 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 LRRC57Q8N9N7 239 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 PIWIL2Q8TC59 973 aaKnown RBP10.29□□□□□ -0.76
PTPRM-203ENST00000400060 SEC14L1Q92503 715 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 TP53INP1Q96A56 240 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 SLC39A3Q9BRY0 314 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 TCF7L2Q9NQB0 619 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 KIF17Q9P2E2 1029 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 CLEC11AQ9Y240 323 aa10.29□□□□□ -0.76
PTPRM-203ENST00000400060 NID2Q14112 1375 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 PNMA6FA0A0J9YX94 578 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 ZNF263O14978 683 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 EIF3EP60228 445 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 C5orf22Q49AR2 442 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 PERM1Q5SV97 790 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 GALNT18Q6P9A2 607 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 DSTYKQ6XUX3 929 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 EFL1Q7Z2Z2 1120 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 ATG9AQ7Z3C6 839 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 PRELID2Q8N945 189 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 POC5Q8NA72 575 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 AFG1LQ8WV93 481 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 PROX1Q92786 737 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 C19orf60Q96EN9 201 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 AGAP3Q96P47 875 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 SMARCAD1Q9H4L7 1026 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 DNAJC18Q9H819 358 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 TRIM45Q9H8W5 580 aaPredicted RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 JMJD4Q9H9V9 463 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 CXorf21Q9HAI6 301 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 DISP2A7MBM2 1401 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 ZNF804BA4D1E1 1349 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 UPP2O95045 317 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 KRT19P08727 400 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 PAMP19021 973 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 HADHAP40939 763 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 RFX5P48382 616 aaPredicted RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 TRIM28Q13263 835 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 SURF1Q15526 300 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 MFSD14BQ5SR56 506 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 TTC23Q5W5X9 447 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 THNSL1Q8IYQ7 743 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 ETNPPLQ8TBG4 499 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 YIPF2Q9BWQ6 316 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 RAPGEFL1Q9UHV5 662 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 DRG1Q9Y295 367 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 FUOMA2VDF0 154 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 CAPN8A6NHC0 703 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 TBX3O15119 743 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 MRPS22P82650 360 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 TRAP1Q12931 704 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 BFSP2Q13515 415 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 MAPRE1Q15691 268 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 POU5F2Q8N7G0 328 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 AMER2Q8N7J2 671 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 GSTCDQ8NEC7 633 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 GANQ9H2C0 597 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 IVNS1ABPQ9Y6Y0 642 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 PIK3C2BO00750 1634 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 BOLA2-SMG1P6H3BVE0 249 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 DDX3YO15523 660 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 CRTAMO95727 393 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 PEX2P28328 305 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 PHKA2P46019 1235 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 HADHBP55084 474 aaKnown RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 TPTEP56180 551 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 VAC14Q08AM6 782 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 BSPRYQ5W0U4 402 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 KBTBD8Q8NFY9 601 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 KLF6Q99612 283 aaPredicted RBP10.28□□□□□ -0.76
PTPRM-203ENST00000400060 TUBA1CQ9BQE3 449 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 USE1Q9NZ43 259 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 AXIN2Q9Y2T1 843 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 KIDINS220Q9ULH0 1771 aa10.28□□□□□ -0.76
PTPRM-203ENST00000400060 NOS1APO75052 506 aaPredicted RBP10.27□□□□□ -0.76
PTPRM-203ENST00000400060 BMP10O95393 424 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms