RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GRIK4Q16099 956 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 SEZ6Q53EL9 994 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ZNF544Q6NX49 715 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ANKMY2Q8IV38 441 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 MYO1HQ8N1T3 1032 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 GRIN3AQ8TCU5 1115 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 CALML6Q8TD86 181 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 RNF112Q9ULX5 631 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 RNF103O00237 685 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 GNSP15586 552 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 NR1D1P20393 614 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 S100A5P33763 92 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 DHPSP49366 369 aaPredicted RBP11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 SOX10P56693 466 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 PTK6Q13882 451 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 MTHFD1LQ6UB35 978 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 OTOP2Q7RTS6 562 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 RTL3Q8N8U3 475 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 MDM1Q8TC05 714 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 TUBB6Q9BUF5 446 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 RHOBTB2Q9BYZ6 727 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ZCCHC2Q9C0B9 1178 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 PAIP1Q9H074 479 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 TASP1Q9H6P5 420 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 POLE3Q9NRF9 147 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ABI3Q9P2A4 366 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 GSAPA4D1B5 854 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 C1QTNF3-AMACRE9PGA6 284 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 HLA-DQA2P01906 255 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 MPOP05164 745 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 APRTP07741 180 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 FGFR4P22455 802 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 HTR1BP28222 390 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ATAT1Q5SQI0 421 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ATAD3BQ5T9A4 648 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ZCCHC8Q6NZY4 707 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 CAPNS2Q96L46 248 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 JSRP1Q96MG2 331 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 TUT1Q9H6E5 874 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 INTS10Q9NVR2 710 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 RGS5O15539 181 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 CPSF4O95639 269 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 IL2P60568 153 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 HERVK_113P62684 666 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ZNF211Q13398 564 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 PABPC1LQ4VXU2 614 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 PRAMEF19Q5SWL8 479 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 HIBCHQ6NVY1 386 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ADGRE3Q9BY15 652 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 GOLPH3LQ9H4A5 285 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 RHBDL2Q9NX52 303 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 COL3A1P02461 1466 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 SPATA31A5Q5VU36 1347 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 SPATA31A7Q8IWB4 1347 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ARHGEF40Q8TER5 1519 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 A0A1W2PQC6 194 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ADH1AP07327 375 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ALPPL2P10696 532 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 CLK2P49760 499 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 B3GALNT2Q8NCR0 500 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 DTNBP1Q96EV8 351 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 S100A13Q99584 98 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 VAV3Q9UKW4 847 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 FZD1Q9UP38 647 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 TRPV2Q9Y5S1 764 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 EVPLLA8MZ36 301 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 CABYRO75952 493 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 PDE9AO76083 593 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 GEMIN4P57678 1058 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 OVOS1Q6IE37 1185 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 SYT2Q8N9I0 419 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 GAL3ST3Q96A11 431 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 OLFM1Q99784 485 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 MXRA8Q9BRK3 442 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 MGAT4DA6NG13 374 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 EYA4O95677 639 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 PGK1P00558 417 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 IL1BP01584 269 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 TCN1P20061 433 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 GPD1P21695 349 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 P3H1Q32P28 736 aa11.3□□□□□ -0.6
CACNA1C-216ENST00000399638 ATP13A4Q4VNC1 1196 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms