RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 SFR1Q86XK3 245 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 KRI1Q8N9T8 703 aaKnown RBP19.16■□□□□ 0.66
UFD1-202ENST00000399523 WBP2Q969T9 261 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 ITM2CQ9NQX7 267 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 EXOC7Q9UPT5 735 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 SPTA1P02549 2419 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 PTPRNQ16849 979 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 HS2ST1Q7LGA3 356 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 NUP93Q8N1F7 819 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 C1orf216Q8TAB5 229 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 SCFD1Q8WVM8 642 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 LARP4BQ92615 738 aaKnown RBP19.15■□□□□ 0.66
UFD1-202ENST00000399523 FBXO32Q969P5 355 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 ZSCAN31Q96LW9 406 aaPredicted RBP19.15■□□□□ 0.66
UFD1-202ENST00000399523 ACCSQ96QU6 501 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 XPO6Q96QU8 1125 aaKnown RBP19.15■□□□□ 0.66
UFD1-202ENST00000399523 GPR174Q9BXC1 333 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 ELOVL4Q9GZR5 314 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 PRORYQ9H606 182 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 INTS13Q9NVM9 706 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 R3HCC1Q9Y3T6 440 aaKnown RBP19.15■□□□□ 0.66
UFD1-202ENST00000399523 NME7Q9Y5B8 376 aa19.15■□□□□ 0.66
UFD1-202ENST00000399523 MGAQ8IWI9 3026 aa19.14■□□□□ 0.66
UFD1-202ENST00000399523 FAM149AA5PLN7 773 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 GOLGA8IPA6NC78 632 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 GOLGA8JA6NMD2 632 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 METTL12A8MUP2 240 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 RTN3O95197 1032 aaPredicted RBP19.14■□□□□ 0.65
UFD1-202ENST00000399523 DDIT3P35638 169 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 GNL1P36915 607 aaPredicted RBP19.14■□□□□ 0.65
UFD1-202ENST00000399523 IFRD2Q12894 506 aaPredicted RBP19.14■□□□□ 0.65
UFD1-202ENST00000399523 L1TD1Q5T7N2 865 aaKnown RBP19.14■□□□□ 0.65
UFD1-202ENST00000399523 PIP4K2CQ8TBX8 421 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 ANKRD36BP1Q96IX9 119 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 DCBLD2Q96PD2 775 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 MRPL45Q9BRJ2 306 aaKnown RBP19.14■□□□□ 0.65
UFD1-202ENST00000399523 ZNF518BQ9C0D4 1074 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 MIR1-1HGQ9H1L0 117 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 CCSER2Q9H7U1 834 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 MARK1Q9P0L2 795 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 SEL1LQ9UBV2 794 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 CHORDC1Q9UHD1 332 aaPredicted RBP19.14■□□□□ 0.65
UFD1-202ENST00000399523 BTBD3Q9Y2F9 522 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 MYO18BQ8IUG5 2567 aa19.14■□□□□ 0.65
UFD1-202ENST00000399523 COL6A6A6NMZ7 2263 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 GOLGA8CPA6NN73 597 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 WASH3PC4AMC7 463 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 TNFSF14O43557 240 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 GREM1O60565 184 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 TACC1O75410 805 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 FAM163BP0C2L3 166 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 ZDHHC11BP0C7U3 371 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 TYRP14679 529 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 PTPN1P18031 435 aaKnown RBP19.13■□□□□ 0.65
UFD1-202ENST00000399523 SUZ12Q15022 739 aaKnown RBP19.13■□□□□ 0.65
UFD1-202ENST00000399523 DCAF12L1Q5VU92 463 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 HTR3DQ70Z44 454 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 ZNF605Q86T29 641 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 OR5B17Q8NGF7 314 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 MMS19Q96T76 1030 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 CBWD1Q9BRT8 395 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 MRPL44Q9H9J2 332 aaKnown RBP19.13■□□□□ 0.65
UFD1-202ENST00000399523 IL37Q9NZH6 218 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 WDR35Q9P2L0 1181 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 PTPRJQ12913 1337 aa19.13■□□□□ 0.65
UFD1-202ENST00000399523 KCNJ18B7U540 433 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 NEDD8-MDP1E9PL57 170 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 CISD3P0C7P0 127 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 ITPKBP27987 946 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 OXTRP30559 389 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 FUT11Q495W5 492 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 MCTP1Q6DN14 999 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 SCAMP5Q8TAC9 235 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 BBS2Q9BXC9 721 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 B3GNT5Q9BYG0 378 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 MKRN2Q9H000 416 aaKnown RBP19.12■□□□□ 0.65
UFD1-202ENST00000399523 SNX25Q9H3E2 840 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 RAI2Q9Y5P3 530 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 STON1Q9Y6Q2 735 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 NUMA1Q14980 2115 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 MYH10P35580 1976 aa19.12■□□□□ 0.65
UFD1-202ENST00000399523 A0A1B0GVT2 93 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 FAM92AA1XBS5 289 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 IGLV3-19P01714 112 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 TNNC2P02585 160 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 HLA-EP13747 358 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 TPMTP51580 245 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 ZNF132P52740 706 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 STARD3Q14849 445 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 DUOXA2Q1HG44 320 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 DYMQ7RTS9 669 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 ZNF843Q8N446 348 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 RASSF8Q8NHQ8 419 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 EIF2B4Q9UI10 523 aaKnown RBP19.11■□□□□ 0.65
UFD1-202ENST00000399523 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.11■□□□□ 0.65
UFD1-202ENST00000399523 ATMQ13315 3056 aa19.11■□□□□ 0.65
UFD1-202ENST00000399523 HECTD1Q9ULT8 2610 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 TMEM131Q92545 1883 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 CYSRT1A8MQ03 144 aa19.1■□□□□ 0.65
UFD1-202ENST00000399523 CLDN5O00501 218 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms