RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 BNC2Q6ZN30 1099 aaPredicted RBP15.1■□□□□ 0.01
RPRD1A-202ENST00000399022 SLC26A11Q86WA9 606 aa15.1■□□□□ 0.01
RPRD1A-202ENST00000399022 MCOLN2Q8IZK6 566 aa15.1■□□□□ 0.01
RPRD1A-202ENST00000399022 CCDC33Q8N5R6 958 aa15.1■□□□□ 0.01
RPRD1A-202ENST00000399022 USP13Q92995 863 aaPredicted RBP15.1■□□□□ 0.01
RPRD1A-202ENST00000399022 TMEM79Q9BSE2 394 aa15.1■□□□□ 0.01
RPRD1A-202ENST00000399022 BEGAINQ9BUH8 593 aa15.1■□□□□ 0.01
RPRD1A-202ENST00000399022 DDX3YO15523 660 aaKnown RBP15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 NAMPTP43490 491 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 RAP1GAPP47736 663 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 RTP1P59025 263 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 SLC1A5Q15758 541 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 UGCGQ16739 394 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 CCDC60Q8IWA6 550 aaPredicted RBP15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 ULK2Q8IYT8 1036 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 CHST13Q8NET6 341 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 ACTL9Q8TC94 416 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 CADM1Q9BY67 442 aaKnown RBP15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 LRRC19Q9H756 370 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 PREBQ9HCU5 417 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 SHOC2Q9UQ13 582 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 RPS12P25398 132 aaKnown RBP15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 CLK2P49760 499 aaKnown RBP15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 CNPY1Q3B7I2 92 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 ACSBG2Q5FVE4 666 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 TTC27Q6P3X3 843 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 NANOGNBQ7Z5D8 188 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 GSTCDQ8NEC7 633 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 EXD1Q8NHP7 514 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 TRAPPC12Q8WVT3 735 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 TMEM109Q9BVC6 243 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 NDEL1Q9GZM8 345 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 C10orf88Q9H8K7 445 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 IGKV6D-41A0A0C4DH26 115 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 CDK7P50613 346 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 KPNA2P52292 529 aaKnown RBP15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 CISHQ9NSE2 258 aa15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 FNDC3AQ9Y2H6 1198 aaKnown RBP15.09■□□□□ 0.01
RPRD1A-202ENST00000399022 C2orf71A6NGG8 1288 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 ETS1P14921 441 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 FOXN2P32314 431 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 ELK3P41970 407 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 HIRAP54198 1017 aaPredicted RBP15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 MRPS22P82650 360 aaKnown RBP15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 HABP4Q5JVS0 413 aaKnown RBP15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 MFSD4BQ5TF39 518 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 PDPK2PQ6A1A2 396 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 ALYREFQ86V81 257 aaKnown RBP15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 PALB2Q86YC2 1186 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 FBXO16Q8IX29 292 aaPredicted RBP15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 APOPT1Q96IL0 206 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 DNAJC1Q96KC8 554 aaKnown RBP15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 COPS7BQ9H9Q2 264 aaPredicted RBP15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 RRN3Q9NYV6 651 aa15.08■□□□□ 0.01
RPRD1A-202ENST00000399022 ALADP13716 330 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 DMPKQ09013 629 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 ACVR2BQ13705 512 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 AMHR2Q16671 573 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 LY6KQ17RY6 165 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 FASTKD1Q53R41 847 aaKnown RBP15.08■□□□□ 0
RPRD1A-202ENST00000399022 GLRA4Q5JXX5 417 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 TLDC1Q6P9B6 456 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 DRAXINQ8NBI3 349 aaPredicted RBP15.08■□□□□ 0
RPRD1A-202ENST00000399022 NAT14Q8WUY8 206 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 TBX10O75333 385 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 E2F6O75461 281 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 THRAP10827 490 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 ARPP19P56211 112 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 TSPY1Q01534 308 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 ZBTB46Q86UZ6 589 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 ZNF606Q8WXB4 792 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 AGAP3Q96P47 875 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 GRHL1Q9NZI5 618 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 NCANO14594 1321 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 UMODL1Q5DID0 1318 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 C1orf232A0A0U1RR37 186 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 DYNC1LI2O43237 492 aaPredicted RBP15.08■□□□□ 0
RPRD1A-202ENST00000399022 SLC4A1P02730 911 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 KRT8P05787 483 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 HMOX2P30519 316 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 C21orf59P57076 290 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 RBP5P82980 135 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 MAP4K3Q8IVH8 894 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 TMCO5AQ8N6Q1 288 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 HPDLQ96IR7 371 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 NMUR2Q9GZQ4 415 aa15.08■□□□□ 0
RPRD1A-202ENST00000399022 C12orf65Q9H3J6 166 aaKnown RBP15.08■□□□□ 0
RPRD1A-202ENST00000399022 PLSCR1O15162 318 aa15.07■□□□□ 0
RPRD1A-202ENST00000399022 GSTA4O15217 222 aa15.07■□□□□ 0
RPRD1A-202ENST00000399022 DCXO43602 365 aa15.07■□□□□ 0
RPRD1A-202ENST00000399022 RARBP10826 455 aa15.07■□□□□ 0
RPRD1A-202ENST00000399022 FKBP1AP62942 108 aaKnown RBP15.07■□□□□ 0
RPRD1A-202ENST00000399022 TFDP3Q5H9I0 405 aa15.07■□□□□ 0
RPRD1A-202ENST00000399022 VSTM1Q6UX27 236 aa15.07■□□□□ 0
RPRD1A-202ENST00000399022 RNF135Q8IUD6 432 aa15.07■□□□□ 0
RPRD1A-202ENST00000399022 CNDP1Q96KN2 507 aa15.07■□□□□ 0
RPRD1A-202ENST00000399022 GCOM2Q9BZD3 368 aaPredicted RBP15.07■□□□□ 0
RPRD1A-202ENST00000399022 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.07■□□□□ 0
RPRD1A-202ENST00000399022 DNAAF2Q9NVR5 837 aaKnown RBP15.07■□□□□ 0
RPRD1A-202ENST00000399022 BFARQ9NZS9 450 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms