RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 WWP1Q9H0M0 922 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 RABGEF1Q9UJ41 708 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF214Q9UL59 606 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 H3BRJ5 948 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 H7C0S8 307 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 AKAP5P24588 427 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 CYP2F1P24903 491 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SERPINB6P35237 376 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SLC8A3P57103 927 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 MGAT5Q09328 741 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 LRRC36Q1X8D7 754 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 C15orf39Q6ZRI6 1047 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 COLGALT1Q8NBJ5 622 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 NDRG1Q92597 394 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 OXNAD1Q96HP4 312 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PIWIL1Q96J94 861 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 APOL2Q9BQE5 337 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 NT5C1AQ9BXI3 368 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SPATC1LQ9H0A9 340 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PRMT7Q9NVM4 692 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 KLHL8Q9P2G9 620 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 STARD13Q9Y3M8 1113 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 MYH7P12883 1935 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 EEF2KO00418 725 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 DGKIO75912 1065 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 MGAT1P26572 445 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 GRIA1P42261 906 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 WASHC2DQ5SRD0 308 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 ISLR2Q6UXK2 745 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 RAPH1Q70E73 1250 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 DNERQ8NFT8 737 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 RNF157Q96PX1 679 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 B3GNT5Q9BYG0 378 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 USP18Q9UMW8 372 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PHRF1Q9P1Y6 1649 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 MYO7AQ13402 2215 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SIGLEC16A6NMB1 481 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 APRTP07741 180 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 ARPP19P56211 112 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 XRCC4Q13426 336 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 FLOT2Q14254 428 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 EFHC2Q5JST6 749 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 C1orf127Q8N9H9 656 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 REPS2Q8NFH8 660 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 OR6J1Q8NGC5 347 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SLC35B2Q8TB61 432 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SLC26A7Q8TE54 656 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 STK32AQ8WU08 396 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PAWRQ96IZ0 340 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 CAMKK2Q96RR4 588 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 BTBD10Q9BSF8 475 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 MECRQ9BV79 373 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 DHX33Q9H6R0 707 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PCDH18Q9HCL0 1135 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 ACSS2Q9NR19 701 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 TMPRSS4Q9NRS4 437 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SETD4Q9NVD3 440 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 AP4E1Q9UPM8 1137 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 TNFSF13BQ9Y275 285 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 ACTL7BQ9Y614 415 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SNCAIPQ9Y6H5 919 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 MKI67P46013 3256 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 ENO4A6NNW6 628 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 LRCH4O75427 683 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PIGRP01833 764 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 NUMBP49757 651 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF280AP59817 542 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 BOLA3Q53S33 107 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 IGDCC3Q8IVU1 814 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 TEX9Q8N6V9 391 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SPDL1Q96EA4 605 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SLC10A4Q96EP9 437 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SGF29Q96ES7 293 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 GBP5Q96PP8 586 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 TBCBQ99426 244 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 NTPCRQ9BSD7 190 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 TBC1D10AQ9BXI6 508 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 RNPEPQ9H4A4 650 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 MINDY3Q9H8M7 445 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 XPNPEP3Q9NQH7 507 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 NKX1-2Q9UD57 310 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 APOBEC2Q9Y235 224 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PIN4Q9Y237 131 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 HEATR1Q9H583 2144 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 GOLGA8QA0A0J9YX86 632 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 GOLGA8OA6NCC3 632 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 GOLGA8NF8WBI6 632 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 USP2O75604 605 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 LGALS2P05162 132 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 FOSL2P15408 326 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 MMP8P22894 467 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 TYK2P29597 1187 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SERPINB4P48594 390 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 CAPRIN2Q6IMN6 1127 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 RIOX2Q8IUF8 465 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PPP4R1Q8TF05 950 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 DCAKDQ8WVC6 231 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 OPTNQ96CV9 577 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 LUC7L3O95232 432 aaKnown RBP5.1□□□□□ -1.59
SMAD4-202ENST00000398417 SLC25A27O95847 323 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms