RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 WDR91A4D1P6 747 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 SMIM22K7EJ46 135 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 PMM2O15305 246 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 PEX1O43933 1283 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 BRINP1O60477 761 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 OXSR1O95747 527 aaPredicted RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 IFNA14P01570 189 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 URODP06132 367 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 KRT7P08729 469 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 M6PRP20645 277 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MAPK3P27361 379 aaPredicted RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TNFRSF8P28908 595 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CLK2P49760 499 aaKnown RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MXRA7P84157 204 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 EPHA7Q15375 998 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CNGA2Q16280 664 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 IFI16Q16666 785 aaKnown RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 KRT79Q5XKE5 535 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 FAM122CQ6P4D5 195 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 UNC13DQ70J99 1090 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 REXO1Q8N1G1 1221 aaKnown RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 GUF1Q8N442 669 aaKnown RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TTLQ8NG68 377 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ITPKCQ96DU7 683 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CFAP57Q96MR6 1250 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ACAT2Q9BWD1 397 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 EMILIN2Q9BXX0 1053 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MINPP1Q9UNW1 487 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 GPR34Q9UPC5 381 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CRYL1Q9Y2S2 319 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CYP3A7-CYP3A51PA0A087WV96 503 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 GOLGA8QA0A0J9YX86 632 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 GOLGA8OA6NCC3 632 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 RCCD1A6NED2 376 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 SMCO2A6NFE2 343 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 GOLGA8NF8WBI6 632 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 H7C0S8 307 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MAFO75444 373 aaPredicted RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CYP3A7P24462 503 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 HTR2BP41595 481 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TECP42680 631 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 KLK7P49862 253 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CARD18P57730 90 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ENPEPQ07075 957 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 C19orf57Q0VDD7 668 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF423Q2M1K9 1284 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MYLK3Q32MK0 819 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 P3H1Q32P28 736 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 XKR9Q5GH70 373 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 SHEQ5VZ18 495 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 SLC6A19Q695T7 634 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ANKS3Q6ZW76 656 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 KRT73Q86Y46 540 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 RGL4Q8IZJ4 473 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 INPP5DQ92835 1189 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CAVIN3Q969G5 261 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TMIGD2Q96BF3 282 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 PPP1R10Q96QC0 940 aaKnown RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 GAS2L1Q99501 681 aaPredicted RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MENTQ9BUN1 341 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CALN1Q9BXU9 219 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 PAIP1Q9H074 479 aaKnown RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TFB2MQ9H5Q4 396 aaKnown RBP6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 GORASP2Q9H8Y8 452 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MLXIPQ9HAP2 919 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TUFT1Q9NNX1 390 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 NMRK1Q9NWW6 199 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 NARFQ9UHQ1 456 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 TRHDEQ9UKU6 1024 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 MAPRE3Q9UPY8 281 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 ASB3Q9Y575 518 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 DUSP10Q9Y6W6 482 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 CNTNAP1P78357 1384 aa6.84□□□□□ -1.31
TM9SF4-202ENST00000398022 SYCE1LA8MT33 242 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 KLRF2D3W0D1 207 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM47E-STBD1D6RA91 191 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 SNPHO15079 494 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 ATMINO43313 823 aaPredicted RBP6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 SMPD2O60906 423 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 GNA14O95837 355 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 ITGBL1O95965 494 aaPredicted RBP6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 CYP2D6P10635 497 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 MZF1P28698 734 aaPredicted RBP6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 HOXA6P31267 233 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 HNMTP50135 292 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 USP46P62068 366 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 KCNC4Q03721 635 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 ACTN3Q08043 901 aaPredicted RBP6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 CENPPQ6IPU0 288 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 NFRKBQ6P4R8 1299 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 ALDH16A1Q8IZ83 802 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 NIPA2Q8N8Q9 360 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 PRR7Q8TB68 274 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 LARP4BQ92615 738 aaKnown RBP6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 TRIM63Q969Q1 353 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 EXOC2Q96KP1 924 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 TRAPPC9Q96Q05 1148 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 PSMB7Q99436 277 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 FANCEQ9HB96 536 aa6.84□□□□□ -1.32
TM9SF4-202ENST00000398022 TAS2R7Q9NYW3 318 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms