RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 FAM172AQ8WUF8 416 aa11.51□□□□□ -0.57
CSGALNACT1-202ENST00000397998 USP13Q92995 863 aaPredicted RBP11.51□□□□□ -0.57
CSGALNACT1-202ENST00000397998 UTP4Q969X6 686 aaKnown RBP11.51□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CNPY3Q9BT09 278 aa11.51□□□□□ -0.57
CSGALNACT1-202ENST00000397998 UPF3AQ9H1J1 476 aaKnown RBP11.51□□□□□ -0.57
CSGALNACT1-202ENST00000397998 QTRT2Q9H974 415 aaKnown RBP11.51□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CDY2AQ9Y6F7 541 aa11.51□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CDY1Q9Y6F8 540 aa11.51□□□□□ -0.57
CSGALNACT1-202ENST00000397998 KAT6AQ92794 2004 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CYP1A1P04798 512 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SUPT20HL2P0C7V6 817 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 EIF4BP23588 611 aaKnown RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TNFSF9P41273 254 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 JAG1P78504 1218 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PTPN11Q06124 597 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GRIK3Q13003 919 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 NME3Q13232 169 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SUPT20HL1Q3ZLR7 823 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 C1orf220Q5T0J3 134 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TMCO4Q5TGY1 634 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MARK2Q7KZI7 788 aaKnown RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 BANPQ8N9N5 519 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CCT7Q99832 543 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GORASP1Q9BQQ3 440 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MMADHCQ9H3L0 296 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TASP1Q9H6P5 420 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CAAP1Q9H8G2 361 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ZNF395Q9H8N7 513 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 APOBEC3GQ9HC16 384 aaKnown RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TMEM63AO94886 807 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CST3P01034 146 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 HMGCRP04035 888 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 NOVP48745 357 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 STX1BP61266 288 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 OCRLQ01968 901 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GSTA3Q16772 222 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GALNT15Q8N3T1 639 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 DDX1Q92499 740 aaKnown RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PTPRN2Q92932 1015 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 HDAC11Q96DB2 347 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 C2orf40Q9H1Z8 148 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SNX25Q9H3E2 840 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MAN1C1Q9NR34 630 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TRPM3Q9HCF6 1732 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 RNF103-CHMP3A0A140T963 221 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TCRBV7S3A2A0A539 114 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 NEK3P51956 506 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GPX6P59796 221 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CYLC2Q14093 348 aaPredicted RBP11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 KRT27Q7Z3Y8 459 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 DHDDSQ86SQ9 333 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 WDR49Q8IV35 697 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SLC44A1Q8WWI5 657 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 EXT2Q93063 718 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 NDNQ99608 321 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TEX13BQ9BXU2 312 aa11.5□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ZFXP17010 805 aaPredicted RBP11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PRPSAP1Q14558 356 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MSS51Q4VC12 460 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 LAYNQ6UX15 382 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PDZD8Q8NEN9 1154 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 RNF217Q8TC41 542 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 JADE3Q92613 823 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 NR1H4Q96RI1 486 aaPredicted RBP11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SNCAIPQ9Y6H5 919 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SIGLEC16A6NMB1 481 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SUPT3HO75486 399 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GMNNO75496 209 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TM7SF2O76062 418 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 C4BPAP04003 597 aaKnown RBP11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CPA3P15088 417 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CASP2P42575 452 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ABCG1P45844 678 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CATSPER1Q8NEC5 780 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SGF29Q96ES7 293 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 FAM167AQ96KS9 214 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 LNPEPQ9UIQ6 1025 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 TRPC5Q9UL62 973 aaPredicted RBP11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 WDR27A2RRH5 827 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 LRCH4O75427 683 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 POLBP06746 335 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PDGFRBP09619 1106 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 CXCL8P10145 99 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 SPRP35270 261 aaPredicted RBP11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 GLRBP48167 497 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 MRPS22P82650 360 aaKnown RBP11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ITKQ08881 620 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 PTPN20Q4JDL3 420 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 ARMC3Q5W041 872 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 C16orf89Q6UX73 402 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 BRSK2Q8IWQ3 736 aa11.49□□□□□ -0.57
CSGALNACT1-202ENST00000397998 RYBPQ8N488 228 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms