RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ATP13A4Q4VNC1 1196 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 SEL1L2Q5TEA6 688 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 BSPRYQ5W0U4 402 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 DENND5BQ6ZUT9 1274 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 SCD5Q86SK9 330 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 RCOR2Q8IZ40 523 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 AUTS2Q8WXX7 1259 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 NAP1L3Q99457 506 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 NGRNQ9NPE2 291 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 NAALADL1Q9UQQ1 740 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 TEX28O15482 410 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 SEC24AO95486 1093 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 RB1P06400 928 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 COPS2P61201 443 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 USP46P62068 366 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 TAZQ16635 292 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 CDO1Q16878 200 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 SDHAF4Q5VUM1 108 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 FAM109BQ6ICB4 259 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 AADACL2Q6P093 401 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 MON1AQ86VX9 555 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 TCEAL8Q8IYN2 117 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 SPPL3Q8TCT6 385 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 TEKT4Q8WW24 435 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 RBM41Q96IZ5 413 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 SEPT5Q99719 369 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 TTLL2Q9BWV7 592 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 CALCOCO1Q9P1Z2 691 aa20.34■□□□□ 0.85
PDLIM2-205ENST00000397761 C3orf70A6NLC5 250 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 FSCN2O14926 492 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 SOAT2O75908 522 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 ARHGEF15O94989 841 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 RARAP10276 462 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 DNAJB2P25686 324 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 YWHAGP61981 247 aaKnown RBP eCLIP20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 PITX1P78337 314 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 BOLA3Q53S33 107 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 SLC13A5Q86YT5 568 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 GOLGA1Q92805 767 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 SLITRK1Q96PX8 696 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 GDF15Q99988 308 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 ABCC13Q9NSE7 274 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 PCDHA11Q9Y5I1 949 aa20.33■□□□□ 0.85
PDLIM2-205ENST00000397761 MYO7AQ13402 2215 aa20.33■□□□□ 0.84
PDLIM2-205ENST00000397761 CHD7Q9P2D1 2997 aa20.33■□□□□ 0.84
PDLIM2-205ENST00000397761 GRXCR1A8MXD5 290 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 MDM4O15151 490 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 PRPSAP2O60256 369 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 IGLV3-25P01717 112 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 CNPP09543 421 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 NCAM1P13591 858 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 SULT1E1P49888 294 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 ARSEP51690 589 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 ARHGAP18Q8N392 663 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 MMGT1Q8N4V1 131 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 NOA1Q8NC60 698 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 FAM71BQ8TC56 605 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 RAPGEF5Q92565 580 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 SAMD11Q96NU1 681 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 C17orf80Q9BSJ5 609 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 NMUR1Q9HB89 426 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 PCSK1NQ9UHG2 260 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 COLQQ9Y215 455 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 TRANK1O15050 2925 aa20.32■□□□□ 0.84
PDLIM2-205ENST00000397761 SLC38A8A6NNN8 435 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 CCDC188H7C350 402 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 CAPN9O14815 690 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 KRT1P04264 644 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 ZDHHC11BP0C7U3 371 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 MYOGP15173 224 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 YWHAQP27348 245 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 GJC1P36383 396 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 PGFP49763 221 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 KLF1Q13351 362 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 EIF4EBP2Q13542 120 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 PPP2R5EQ16537 467 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 CHRDL2Q6WN34 429 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 ANKS1BQ7Z6G8 1248 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 VSIG1Q86XK7 387 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 ZWILCHQ9H900 591 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 RBM12Q9NTZ6 932 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 EFR3BQ9Y2G0 817 aa20.31■□□□□ 0.84
PDLIM2-205ENST00000397761 M0QYT0 321 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 KDELR1P24390 212 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 DNAJB1P25685 340 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 RDXP35241 583 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 CDKN2BP42772 138 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 PSEN1P49768 467 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 ERVFC1P60507 584 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 C2orf54Q08AI8 447 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 SIX1Q15475 284 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 LONRF2Q1L5Z9 754 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 SMTNL2Q2TAL5 461 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 HABP4Q5JVS0 413 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 MSANTD2Q6P1R3 559 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 LILRA6Q6PI73 481 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 MFSD7Q6UXD7 560 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 SPOCD1Q6ZMY3 1216 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 TMC7Q7Z402 723 aa20.3■□□□□ 0.84
PDLIM2-205ENST00000397761 PSTKQ8IV42 348 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms