RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 USP10Q14694 798 aaKnown RBP15.94■□□□□ 0.14
LSS-202ENST00000397728 C9orf57Q5W0N0 161 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 C16orf59Q7L2K0 433 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 C12orf29Q8N999 325 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 ARNTL2Q8WYA1 636 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 DCLK3Q9C098 648 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 TKTL2Q9H0I9 626 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 PDZD7Q9H5P4 517 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 RBM22Q9NW64 420 aaKnown RBP eCLIP15.94■□□□□ 0.142e-8■■■□□ 15
LSS-202ENST00000397728 CCDC195A0A1B0GUA6 201 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 HMGB1P1B2RPK0 211 aaPredicted RBP15.94■□□□□ 0.14
LSS-202ENST00000397728 CLTBP09497 229 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 CHRM3P20309 590 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 DUSP4Q13115 394 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 LINC00523Q86TU6 105 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 WDR75Q8IWA0 830 aaKnown RBP15.94■□□□□ 0.14
LSS-202ENST00000397728 ARHGAP28Q9P2N2 729 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 GOLGA8RI6L899 631 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 CLDN5O00501 218 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 PCDH8O95206 1070 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 HADHAP40939 763 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 MARC1Q5VT66 337 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 PHLDB3Q6NSJ2 640 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 MFN1Q8IWA4 741 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 RMDN2Q96LZ7 410 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 C2orf81A6NN90 581 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 PAX3P23760 479 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 COILP38432 576 aaPredicted RBP15.94■□□□□ 0.14
LSS-202ENST00000397728 KIF19Q2TAC6 998 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 SPOCD1Q6ZMY3 1216 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 FAM47EQ6ZV65 393 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 CALML6Q8TD86 181 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 VCPIP1Q96JH7 1222 aa15.94■□□□□ 0.14
LSS-202ENST00000397728 SETD1AO15047 1707 aaKnown RBP15.94■□□□□ 0.14
LSS-202ENST00000397728 DDX3XO00571 662 aaKnown RBP eCLIP15.93■□□□□ 0.14
LSS-202ENST00000397728 C22orf31O95567 290 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 NPAS4Q8IUM7 802 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 FGD4Q96M96 766 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 KCTD10Q9H3F6 313 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 UBP1Q9NZI7 540 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 SUN2Q9UH99 717 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 OR6C75A6NL08 312 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 SMIM24O75264 130 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 SP2Q02086 613 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 E2F5Q15329 346 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 ZNF618Q5T7W0 954 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 EPS8L1Q8TE68 723 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 ELMO2Q96JJ3 720 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 FGFBP2Q9BYJ0 223 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 XPNPEP1Q9NQW7 623 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 TRUB2O95900 331 aaKnown RBP15.93■□□□□ 0.14
LSS-202ENST00000397728 SERPIND1P05546 499 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 BMP6P22004 513 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 ITGA8P53708 1063 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 MAGOHP61326 146 aaKnown RBP15.93■□□□□ 0.14
LSS-202ENST00000397728 FPGSQ05932 587 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 LBRQ14739 615 aaKnown RBP15.93■□□□□ 0.14
LSS-202ENST00000397728 ATAD1Q8NBU5 361 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 CCDC197Q8NCU1 140 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 BCAS3Q9H6U6 928 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 GTF2IRD1Q9UHL9 959 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 RAD51CO43502 376 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 OR4Q2P0C623 313 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 BMT2Q1RMZ1 405 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 DDX42Q86XP3 938 aaKnown RBP eCLIP15.93■□□□□ 0.148e-8■■■□□ 14.6
LSS-202ENST00000397728 NUP93Q8N1F7 819 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 PDZD8Q8NEN9 1154 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 ACTL9Q8TC94 416 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 HSFY1Q96LI6 401 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 TBCBQ99426 244 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 ARHGAP39Q9C0H5 1083 aa15.93■□□□□ 0.14
LSS-202ENST00000397728 AAR2Q9Y312 384 aaKnown RBP15.93■□□□□ 0.14
LSS-202ENST00000397728 MCL1Q07820 350 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 NAA30Q147X3 362 aaPredicted RBP15.92■□□□□ 0.14
LSS-202ENST00000397728 ZNF792Q3KQV3 632 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 ZC3H12AQ5D1E8 599 aaKnown RBP15.92■□□□□ 0.14
LSS-202ENST00000397728 C4orf22Q6V702 233 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 ANKRD52Q8NB46 1076 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 EXD1Q8NHP7 514 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 SEZ6LQ9BYH1 1024 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 SLC9A3R1O14745 358 aaPredicted RBP15.92■□□□□ 0.14
LSS-202ENST00000397728 AMPD1P23109 780 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 GEMIN4P57678 1058 aaKnown RBP15.92■□□□□ 0.14
LSS-202ENST00000397728 CCDC38Q502W7 563 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 ZBTB18Q99592 522 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 CEP41Q9BYV8 373 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 CPSF2Q9P2I0 782 aaKnown RBP15.92■□□□□ 0.14
LSS-202ENST00000397728 TRPM3Q9HCF6 1732 aaPredicted RBP15.92■□□□□ 0.14
LSS-202ENST00000397728 RARGP13631 454 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 GABRR2P28476 465 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 MBTD1Q05BQ5 628 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 ZBTB41Q5SVQ8 909 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 C3orf62Q6ZUJ4 267 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 RNF217Q8TC41 542 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 PYGLP06737 847 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 FDFT1P37268 417 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 TARBP2Q15633 366 aaKnown RBP15.92■□□□□ 0.14
LSS-202ENST00000397728 PPIL6Q8IXY8 311 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 C3orf20Q8ND61 904 aa15.92■□□□□ 0.14
LSS-202ENST00000397728 WNT8BQ93098 351 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms