RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 C2CD2LO14523 706 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 CTIFO43310 598 aaKnown RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 GRAP2O75791 330 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 TRUB2O95900 331 aaKnown RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 NCAM1P13591 858 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 DNA2P51530 1060 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 YWHAGP61981 247 aaKnown RBP eCLIP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 TAF5Q15542 800 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 ARL13BQ3SXY8 428 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 BSPRYQ5W0U4 402 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 BTBD8Q5XKL5 378 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 ELMSAN1Q6PJG2 1045 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 ITIH5Q86UX2 942 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 CMASQ8NFW8 434 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 UBXN4Q92575 508 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 RUBCNQ92622 972 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 NTAN1Q96AB6 310 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 TRMT2BQ96GJ1 504 aaKnown RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 FRMD8P1Q9BZ68 369 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 TLR9Q9NR96 1032 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 RCOR3Q9P2K3 495 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 ZNF185O15231 689 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 TADA3O75528 432 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 TJP3O95049 919 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 FGGP02679 453 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 RALAP11233 206 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 SULT1E1P49888 294 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 TAS2R40P59535 323 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 DDR2Q16832 855 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 LONRF2Q1L5Z9 754 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 TFDP3Q5H9I0 405 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 ZFYVE27Q5T4F4 411 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 ERMARDQ5T6L9 678 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 DCAF12L1Q5VU92 463 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 BHLHA9Q7RTU4 235 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 HDAC7Q8WUI4 952 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 MYRFLQ96LU7 910 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 LMAN2LQ9H0V9 348 aa19.85■□□□□ 0.77
TSPAN4-204ENST00000397404 PLXNA3P51805 1871 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 FSCN2O14926 492 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 TEX28O15482 410 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 VNN2O95498 520 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 CXCL14O95715 111 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 SLC2A3P11169 496 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 PYGMP11217 842 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 BMP8BP34820 402 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 KPNA1P52294 538 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 HDAC4P56524 1084 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 ERVK-21P61565 698 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 ATP11AP98196 1134 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 SNX30Q5VWJ9 437 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 TRNP1Q6NT89 227 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 SLC13A5Q86YT5 568 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 MMGT1Q8N4V1 131 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 ARFGAP1Q8N6T3 406 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 SPPL3Q8TCT6 385 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 RNF139Q8WU17 664 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 SERPINB11Q96P15 392 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 UBE2OQ9C0C9 1292 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 ENTPD7Q9NQZ7 604 aa19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.84■□□□□ 0.779e-7■■■□□ 18.4
TSPAN4-204ENST00000397404 FEZ2Q9UHY8 353 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-204ENST00000397404 KRIT1O00522 736 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 KRT1P04264 644 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 EPHB3P54753 998 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 DEUP1Q05D60 604 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 SCAPQ12770 1279 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 C15orf59Q2T9L4 293 aaPredicted RBP19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 BRMS1LQ5PSV4 323 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 MSANTD2Q6P1R3 559 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 CCDC50Q8IVM0 306 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 TNS4Q8IZW8 715 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 MRPL43Q8N983 215 aaKnown RBP19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 TTC13Q8NBP0 860 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 SCAMP5Q8TAC9 235 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 FAM71BQ8TC56 605 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 FBXO32Q969P5 355 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 GDF15Q99988 308 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 TCF25Q9BQ70 676 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 SMOC2Q9H3U7 446 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 CYP4F11Q9HBI6 524 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 MSRAQ9UJ68 235 aa19.83■□□□□ 0.76
TSPAN4-204ENST00000397404 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 SLC38A8A6NNN8 435 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 M0QYT0 321 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 PRRG1O14668 218 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 ADAM12O43184 909 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 ZNF189O75820 626 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 FYNP06241 537 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 ZDHHC11BP0C7U3 371 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 MCM3P25205 808 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 HTR7P34969 479 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 MARCKSL1P49006 195 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 TUBP50607 506 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 SHHQ15465 462 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 DPYSL2Q16555 572 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 TAZQ16635 292 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 PTPROQ16827 1216 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms