RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ACCSQ96QU6 501 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 KIF2CQ99661 725 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 PRORYQ9H606 182 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 PRDM16Q9HAZ2 1276 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 PDE11AQ9HCR9 933 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 ITM2CQ9NQX7 267 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 DNAJC17Q9NVM6 304 aaKnown RBP8.96□□□□□ -0.98
SCFD1-202ENST00000396629 INTS13Q9NVM9 706 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 IL37Q9NZH6 218 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 EXOC7Q9UPT5 735 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 FNDC3AQ9Y2H6 1198 aaKnown RBP8.96□□□□□ -0.98
SCFD1-202ENST00000396629 RAD54BQ9Y620 910 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 CKAP5Q14008 2032 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 METTL12A8MUP2 240 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 TACC1O75410 805 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 CISD3P0C7P0 127 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 DDIT3P35638 169 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 TUBP50607 506 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 KIAA1324Q6UXG2 1013 aaKnown RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 HTR3DQ70Z44 454 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 KRI1Q8N9T8 703 aaKnown RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 C1orf216Q8TAB5 229 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 SCFD1Q8WVM8 642 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 FBXO32Q969P5 355 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 ERLEC1Q96DZ1 483 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 XPO6Q96QU8 1125 aaKnown RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 MRPL45Q9BRJ2 306 aaKnown RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 GPR174Q9BXC1 333 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 ELOVL4Q9GZR5 314 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 MARK1Q9P0L2 795 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 SEL1LQ9UBV2 794 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 CELSR3Q9NYQ7 3312 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 TP53BP1Q12888 1972 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 PTPRJQ12913 1337 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 GOLGA8IPA6NC78 632 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 GOLGA8JA6NMD2 632 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 KCNJ18B7U540 433 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 TULP1O00294 542 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 BCAT2O15382 392 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 GREM1O60565 184 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 ZDHHC11BP0C7U3 371 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 PTPN1P18031 435 aaKnown RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 GNL1P36915 607 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 SUZ12Q15022 739 aaKnown RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 PTPRNQ16849 979 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 DCAF12L1Q5VU92 463 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 HS2ST1Q7LGA3 356 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 OR5B17Q8NGF7 314 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 B3GNT5Q9BYG0 378 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 ZNF518BQ9C0D4 1074 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 CCSER2Q9H7U1 834 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 COMMD8Q9NX08 183 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 WDR35Q9P2L0 1181 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 CHORDC1Q9UHD1 332 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 BTBD3Q9Y2F9 522 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 R3HCC1Q9Y3T6 440 aaKnown RBP8.95□□□□□ -0.98
SCFD1-202ENST00000396629 RAI2Q9Y5P3 530 aa8.95□□□□□ -0.98
SCFD1-202ENST00000396629 COL5A1P20908 1838 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-202ENST00000396629 MYLKQ15746 1914 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 FAM92AA1XBS5 289 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 FAM149AA5PLN7 773 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 WASH3PC4AMC7 463 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 TNFSF14O43557 240 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 IGLV3-19P01714 112 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 TYRP14679 529 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 OXTRP30559 389 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 ZNF132P52740 706 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 IFRD2Q12894 506 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-202ENST00000396629 FUT11Q495W5 492 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 MCTP1Q6DN14 999 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 PIP4K2CQ8TBX8 421 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 CBWD1Q9BRT8 395 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 MIR1-1HGQ9H1L0 117 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 SNX25Q9H3E2 840 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 MRPL44Q9H9J2 332 aaKnown RBP8.94□□□□□ -0.98
SCFD1-202ENST00000396629 FBXO10Q9UK96 956 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 STON1Q9Y6Q2 735 aa8.94□□□□□ -0.98
SCFD1-202ENST00000396629 A0A1B0GVT2 93 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 GOLGA8CPA6NN73 597 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 NEDD8-MDP1E9PL57 170 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 CLDN5O00501 218 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 TNNC2P02585 160 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 IRF1P10914 325 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 GAP43P17677 238 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 ITPKBP27987 946 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 LONP1P36776 959 aaKnown RBP8.93□□□□□ -0.98
SCFD1-202ENST00000396629 TPMTP51580 245 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 GRIN1Q05586 938 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 ENPP2Q13822 863 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 SURF1Q15526 300 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 DUOXA2Q1HG44 320 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 DYMQ7RTS9 669 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 GPD1LQ8N335 351 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 SCAMP5Q8TAC9 235 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 SPOCK2Q92563 424 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 DNAJC19Q96DA6 116 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 DCBLD2Q96PD2 775 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 MMS19Q96T76 1030 aa8.93□□□□□ -0.98
SCFD1-202ENST00000396629 BBS2Q9BXC9 721 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms