RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TPD52L2O43399 206 aaKnown RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 CHP2O43745 196 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 FGFR3P22607 806 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 QPRTQ15274 297 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 TMEM179Q6ZVK1 233 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 MYCBPAPQ8TBZ2 947 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 OSBPL3Q9H4L5 887 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ELOVL6Q9H5J4 265 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 SH3BP1Q9Y3L3 701 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 MROH7Q68CQ1 1323 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 BCLAF3A2AJT9 711 aaKnown RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 GLRBP48167 497 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 RPS6KA3P51812 740 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 CDH18Q13634 790 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 NCOA4Q13772 614 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ANKARQ7Z5J8 1434 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 PHACTR4Q8IZ21 702 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ASAP1Q9ULH1 1129 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 SLC9A8Q9Y2E8 581 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 TCEA3O75764 348 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 HMBSP08397 361 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 CASP5P51878 434 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 DGCR6Q14129 220 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 PVALEFA0A1B0GWK0 134 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 AGRPO00253 132 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 HPCAL1P37235 193 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 FMO5P49326 533 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 BST2Q10589 180 aaKnown RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 GRIK3Q13003 919 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 NAPEPLDQ6IQ20 393 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ZFP1Q6P2D0 407 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 RIPOR1Q6ZS17 1223 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 BLOC1S5Q8TDH9 187 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 B3GALT6Q96L58 329 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 RPS6KL1Q9Y6S9 549 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF879B4DU55 563 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 FKBP6O75344 327 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 APBA3O96018 575 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 CCNA2P20248 432 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 FDFT1P37268 417 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 HARS2P49590 506 aaKnown RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 EFNA5P52803 228 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 TUBA4AP68366 448 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ERMARDQ5T6L9 678 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 THOC7Q6I9Y2 204 aaKnown RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 OR7A2PQ8NGA2 310 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 OSCP1Q8WVF1 389 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 SEPT5Q99719 369 aaPredicted RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 CYP7B1O75881 506 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 HLA-DQA2P01906 255 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 IFNGR2P38484 337 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 CRKLP46109 303 aaKnown RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 GRSF1Q12849 480 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 MYBPC2Q14324 1141 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 C4orf22Q6V702 233 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 AKAP14Q86UN6 197 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 FLAD1Q8NFF5 587 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF112Q9UJU3 913 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 PSMD11O00231 422 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ANXA6P08133 673 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 PRKAR1AP10644 381 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 LRRC6Q86X45 466 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 COL23A1Q86Y22 540 aaPredicted RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 ISCUQ9H1K1 167 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 EPB41L4BQ9H329 900 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 NPHP3-ACAD11A0A0J9YXS1 232 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 SMCO3A2RU48 225 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 SUPT7LO94864 414 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 FGD3Q5JSP0 725 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 PDPK2PQ6A1A2 396 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 CCNI2Q6ZMN8 369 aaPredicted RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 STN1Q9H668 368 aaKnown RBP10.62□□□□□ -0.71
COL4A4-201ENST00000396625 COPRSQ9NQ92 184 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 MAPK10P53779 464 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 FMR1NBQ8N0W7 255 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 AP3S1Q92572 193 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 C9orf16Q9BUW7 83 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 TRIM10Q9UDY6 481 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 LYVE1Q9Y5Y7 322 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 SMIM22K7EJ46 135 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 RAD17O75943 681 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF37AP17032 561 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 CEBPGP53567 150 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 NAB2Q15742 525 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 AGKQ53H12 422 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 SWSAP1Q6NVH7 229 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 LRRC34Q8IZ02 419 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 USP13Q92995 863 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 FAM20AQ96MK3 541 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 CLCC1Q96S66 551 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 N6AMT1Q9Y5N5 214 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 A0A0B4J269 797 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 PMPCBO75439 489 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 CCDC166P0CW27 439 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 TUBB3Q13509 450 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 NECAB2Q7Z6G3 386 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 GUF1Q8N442 669 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms